Transcript Information: R_Transcript_446929.p1


Annotated TAIR IDAT1G14420.1
Annotated Gene NamePectate lyase family protein
Annotated Gene Symbol(s)AT59
Annotation TypeOrtholog
Chromosome Positionchr1:4931844-4933405 | Reverse length=459
E-Value4.6E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10995759611276
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.21869410386008
Condition 3: 24 Hour
Replicate 10
Replicate 20.53145202145969
Replicate 30.13185364269215


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_446929.p1 GENE.R_Transcript_446929~~R_Transcript_446929.p1 ORF type:5prime_partial len:166 (+),score=23.31,Pec_lyase_C|PF00544.15|1.7e-12 R_Transcript_446929:1-498(+)
TCTAATTGTCACTTCACAGACCATAATGATGTGATGTTGTTTGGAGCAAGTGATAGCAAATCAGAAGACCAGATCATGCAGATCACCCTGGCTTTCAACCACTTTGGCAAGCGATTAATTCAAAGGATGCCAAGATGCAGATGGGGTTTCTTCCATGTGGTTAACAATGACTACACACACTGGGAAATGTATGCCATTGGAGGGAGCAAACATCCTACTATCATTAGTGAAGGCAATCGTTTCATCGCTCCCCCTAATCGGTTTGCCAAAGAGGTGACCAAGAGGGAGTATTCACCAGAGAGTGTGTGGAAGGATTGGTTGTGGACATCAGATGGGGATTTACTAATAAATGGAGCATACTTCATACAATCAGGTGATAAAAAGAAGAGAGCTTCTTTCACCAAGCAAGATATGATCACTGCAAAGCCTGGCAGCTATGTAAGACGCCTTACTCGCTTTGCAGGAGCCCTTAATTGCGATGTACACAAACCATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_446929.p1 GENE.R_Transcript_446929~~R_Transcript_446929.p1 ORF type:5prime_partial len:166 (+),score=23.31,Pec_lyase_C|PF00544.15|1.7e-12 R_Transcript_446929:1-498(+)
SNCHFTDHNDVMLFGASDSKSEDQIMQITLAFNHFGKRLIQRMPRCRWGFFHVVNNDYTHWEMYAIGGSKHPTIISEGNRFIAPPNRFAKEVTKREYSPESVWKDWLWTSDGDLLINGAYFIQSGDKKKRASFTKQDMITAKPGSYVRRLTRFAGALNCDVHKPC*

Click here to download the sequence:
Link to NCBI Protein BLAST