Transcript Information: R_Transcript_44707.p1


Annotated TAIR IDAT2G39580.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:16510540-16516948 | Forward length=1577
E-Value1E-221
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2800109558505
Replicate 25.4762694733908
Replicate 36.785750822469
Condition 2: 8 Hour
Replicate 16.482766942188
Replicate 27.1645321244945
Replicate 39.5196473911304
Condition 3: 24 Hour
Replicate 18.1429883983594
Replicate 25.8888409067028
Replicate 37.0006205547187


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44707.p1 GENE.R_Transcript_44707~~R_Transcript_44707.p1 ORF type:complete len:1779 (+),score=415.16,zf-C3H1|PF10650.5|9.8e-11 R_Transcript_44707:105-5339(+)
ATGGCGTCAATTTCAGCGCCACCTCAGAACCCTAATCCCAATACTAAGCCCAATCCCCCTTCTAAGGTCAGAGAAGAAGGAGAGCTCACTTCATCTGACGACGATGTCGATGCACCCCCTGCTGCTTCAGTTGCTCCATTGACTAGTATTTCTGCTCCTCCATCCAGTTCTGTTCCAAATGCTTCAGTGAAATCTAGTGTGCAAGTTGTTAACTCAGGAAAGTCAGTTTCCGCAAATCTTCCTGCTAGAACCGCTGAAACACAGTCCCAGACACCTGGGTATCGCAAAGGCTTTAGTAAGAACCAAATATCATTGAAGCCAAGTAATCCTGGATGGTGTGCTCCTGGTGCGGATAATAATCTTGTGATTAGTTTCTCAGATGATGATGATAGTGGTAGTGATGGGGAAGAAAGAAAACAAAAGAAAGGTCAAAGAACTGATGGACTCCTGCAAGCAGTAAAAAGCAATCGAAAACCACCTGCTTTGCCCAATGTGAAATTGGACCTTGCAGGAAGAACTGCAAAAAAGGTAGCACAAAAGAAGGTGTCATTAAGTCGTACATTTGCCTCATCAGCTGCCAAGACCCATGGTCCCAGTGTAAGAAGTGGTGGATCATCCTTAGCTGAGCAGCGATCTAGCTTGATGAGTACCAATGTGGCTGGTAGGATTTCATCAATCCAAGATCGTGGAAGCAAAAGTGTGGATCTGAGCAGTAGCAAACTTCAGGACTTACGCCAACAGATTGCCATGCGTGAGAACGAACTGAAACGTAAAATAGTGCAGAAAAATAAGGAAAATATCTCAGATGCTTGCAGAGATGTCAATGTTATGGGCCAGAACAAACTGCCATCTAAGAAAAGCAGGGCACTTCCTTCTGATCTACATACCGAGCTTGAAGAGCCTGATAGAAAACGCCTAAAAAATGCTCAATATGGTTCTGAACAACCAAGTTCCAGTGGCCAGCATTTGAAACTTGCAGAACCAATGTCAGTGCGGAATGAGACACTGAGAGGACATTTAGTTGATCATGCCAATTTTGACACAGATAATTTGCAGAGGGAACTGATGCCATTGTCTGATGGAAGACAGTTTTCATCCACATCACAATCTCATTCAGCTGCTATTGTCGCTGTCAGTTGCAGCCTCTCAGACTGGATTTCTAGACCTAATGAGGCTTTGACTATGCCAAAGCAAAGTGCATTAGTAACAAATTCCGCCTTTTCTGATACGTTAGATAAATCAATGACAAAGAACCCAGGAGTGGTATACGAGAAGCAGCCCTCAAGTTCTGATGCGAACAAAGTTATTCATGGGAGCAACATGATCAAGGTCAATGATCATTGTGATGTTATGTCTGCACGTGAGAAATTCAAGTCTGCATCTGACTGCTGCCTGCAGGCTTGCCCTTTGCAAGTATCAGATAGCAAGTTTGAGAGTCCTGATGCATCTCCAGACAACACTAGTCTCTTACGTTCTCTGGGTAGGTCTACAGTCTCGAGGCGTAGTGATGTGGATTTAATTTCACTATTTGAAAATGAGGAGTTGCATGATAAGGAGCTGGAAGAAGCTCAAGAGCATAGGCGAAAATGTGAAATTGAAGAAAGAAATGCTCTTAATGCTTATCGTAGAGCACAAAGGTCATTAGCTGAGGCTAATGCTCGATGCACGTATCTCTATCGCAAGAGGGAAATGTATTCAGCTCAGCTTCGTTCCTTAGTGATGGAGGAATCCAGTTTATTATGGTCTTCTCAGCATAGACAAACTGGTGATGCATGGAATTTATCGAACAATGTCTCTGAAGTTAATTTAGAATTAATTCCATCATCAAGCCGTCAATTTCAAGCTGAAGTTGAAGCTGGAAACCAATTGGGTTATGATTCAAATGTCCAAAGTGCAGATGGTGATGCACACTACAGGTCTTCTGGGAACGAGGATGGACACAATTTTGGCTCTGAAGCTTGCAGTGAACCTGATGCTAGCACATCTCAGCTAAATAATTCTGATGCTAATGGTGTTTATTCAGAATGCAATAATCAAAATTTATCTCCAGATGATGACGATGAGACATTTTCTTTGGATCATGAAGCTGGGCATGCCAATGTGATGACTCTGCGAGGGGAGGTCAACACTAAAAAAGATGAAATGAACATGGGTACAAAATTTTTAACTGATGGGTCTCGGGATCCTTTAGTTCTTGAAGCATATTTGAGGTCCAAATTGTTTTCACGGCTAGGAGTGATTAGTTCTTCAAAGCAAGGTGGCACTTACAGTGATTCAGCAGTAGGAAAAGTTTCTGATGAAGATGTTGCAGGACCACAAACACAGGTAGTCATGGAAAGTGTTTCACCTTCTGATCACGAGGTCTTGAATGACGATCACGGAGATGGCCCCAAGGAACCTGAAGGCAGCATATTTAAGGCACCTTTAAATTCTAAAAACCTACTACATGTTGAAGAGCATTCTCTAAATAATTCACCTAGCCCTACTTTAGTTCCTGAAGGCAGCAGCTTTCACATGGTAGATATGACTTCATCACCAATTATTCAATCATCTTCTATCTTTAGGAGTGCAATGAAGGCTGCAGGTCCAGTCAGCTTGGACAGTATGCAGGTTAGGGAACAGCATTATGGTTCTCCAGATATGTGCACTGATAATGGTTCACTTGTTAATTGTAGTCAAGATAAGTTGACCTTGAGTGTGGTGAGCGCTGCTGTGGAGGTTGCCCATTGTGTTAGCTTTGATAAAATTGATTCGTACACTTGCAAGTCTGCAATTGATCCATTTTGGCCTCTATGCATGTACGAGCTTAGAGGAAGATGCAACGATGATGAATGCCCTTGGCAGCATGTGAAAGATTACTCGAGGAATATTATCCAGCTCGAAAGTTCTAATAGTGCTGATTTACAGACTGGATCCTCATCTCCATGTGGGAAGCAGAGGGCCTGTGCAGAACGTTCTAATGTCTTGATTCCCCCAAGATATTTAGTTTGCTTGGATAGTCTGAAAGCTGATTCTTATGGTTCTCTTCAAGCTCGTCAGCTTGCATTATCTCTGAGAAATGTTTTCAGTAACTCTTTGGCTGTTTCGAGTTCACTCTTAAAGCATCTTCCTTCAGATGAACCATATTTGCATGGAAATGATGGCTGTGTTGAGTCTTATGGTGGCAGTGGACAGTCTTTGTATTTTCGAAAAAGAAATGGCACTGGGAATCCCCTCCAGAATGGTTCAGCCAATAATGACCACTGTCTGGAAATGGCTCTGCTTGTATTGAATCAGGAGATTAGCAAAATTGAGGGTATTAAAAAGGCTCTTGTGATACTTTCTCGGGCTCTTGAAGCTGATCCTGCATCATTACATCTCTGGATTGTTTACCTGCTCCTTTATTATTCGACAAAGAGCTCAGACAGTGAGCTCAGCAAAAAAGCTGCAGTTGGTGAAGATGATTTTTTCTCTTGTGCTGTCAAGCACCATGAGCAATCATATGAATTGTGGCTCTTGTACATCAACAGTCGTAGAAGACTAAATGATCGCTTGGCTGCTTACGAAAGGGCAATTTCCCGCTTTTGCCACCATGCATCCCACATTGATGGAAACATGATGCATCACAGTGCTGCCATCTTGGACCTGTTTCTGCAGATGATGCATTGTTTGTGCATGTCAGGAAATGTTCCAAAGGCAGTCCAGAGAATCTGTGGACTCGTTCTCGCTGATAGAGATTGCGATGAGTCTCATTCTCTCTTGCTTTCTGATATTCTTCAATGCTTAACGATAACTGACAAATGTATCTTCTGGGTTTGTTGTGTGTACTTAGTGATCTACAGGAAACTGCCTGATGCAATGGTGCAGCAGTTTGAATTTGAGAAAGATATGTCTATAATGGAGTGGCCCTCTGTCCATTTAACACTTGAAAAAAAGCAGCAAGTGTCCAAGCTGATGGAAATGGCTATAGATTCTGTTGGATTGCATGTCGACAACAAATCCCATGAGGATGAAGGTAGTACTGCCAAATCAGCTTACCTGATTGCAGTGAACCACATTAAGCTTATGGCAGCAATAGATGGTGAAGAAAGCTATACAAAGTTTCTTGAGAAGTATAAGAACTTGTATCCATCTTGTTTAGAACTTGTTCTATTGTCAGCAAGAGCTCATTGTGTCGGTGAAAGTGCAAATTTTGAAGGGTTTGAAGCAGCTATAAGTAATTGGTCAAAAGAGATTCCTGGGATTCAGTGCATCTGGAACCAATTTGTGGAATATGTTTTGGAGAATGGAAAACCCTGTCAGGCAAAAGAAATATTGGATAAGTGGTTTAACTTAGTGTGGAAGTGTCAATTTCATCACAACCAGTTGATTGATGGCAAGCATGAAGACATCCAGAGCAGTCCTGTAGATCTGTCAGGGTCGGATTTTAATGCTCTGCTTTCATCATCTAACAAAATTGATGCTGTTTTTGCACTGCTCAACCTCTCTCTATATAAAATGTTCCATGATGACCCATTTGAAGCTCAGTTGGCAATTGACAAAGCTCTGAGAGTTGCTGATCCTGATGTATTCAGACATTTTGTCAGGGAGCATGCTGTGTTTTTGTTCAACAATTCATCTCAGTTGAGAAAGGACATCTCTGTTCATGGGTTGCTGGACATTCTAAAGGCTTATATGAGTCACGCATGGGCTATTCCTGCTCGAGATCCATTGACCAGAATGTTCGTTAAGGACATCCAAAAGCCGAGATTGAGGCAGCTTGTGATTAACATCTTAAATCCGATTTCAACTGATACTTGCCTGGTCAATTCATTTCTTGATGTCTGGTTTGGCTCATCCTTCTTGCTTCAAAAGTCGATTGAGCTAAAAGATTTAGTGGACTTTGTGGAAGCGATTCTGGAAGTCTCACCTGCCAACTATCAGCTTGTGATCTCCGTCTGTAGGTTTCTCTGCCAAGACACTGTTGCCTGCAATACTAAATCAGCCAGTGTCTTGTTCTGGGCAAGCTCATCACTGGTTAACACACTCTATCATGCTGTCCCCGTTCCTCCAGAGTACGTATGGACAGAAGCTGCAGATTTGTTGCAAAAACTAACAAATGTAAGAGAAATTTCAGAGAGCTTCCATCAAAGGGCTCTATCAGTATATCCGTTCTCCATCAAGTTGTGGAAGTCCTTCCTTCACCTGTCAGTGAGCACCGACAAGAGGAAGAGTATTGTCGAAGCAGCAAAAGACAAGGGTATACAGCTTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44707.p1 GENE.R_Transcript_44707~~R_Transcript_44707.p1 ORF type:complete len:1779 (+),score=415.16,zf-C3H1|PF10650.5|9.8e-11 R_Transcript_44707:105-5339(+)
MASISAPPQNPNPNTKPNPPSKVREEGELTSSDDDVDAPPAASVAPLTSISAPPSSSVPNASVKSSVQVVNSGKSVSANLPARTAETQSQTPGYRKGFSKNQISLKPSNPGWCAPGADNNLVISFSDDDDSGSDGEERKQKKGQRTDGLLQAVKSNRKPPALPNVKLDLAGRTAKKVAQKKVSLSRTFASSAAKTHGPSVRSGGSSLAEQRSSLMSTNVAGRISSIQDRGSKSVDLSSSKLQDLRQQIAMRENELKRKIVQKNKENISDACRDVNVMGQNKLPSKKSRALPSDLHTELEEPDRKRLKNAQYGSEQPSSSGQHLKLAEPMSVRNETLRGHLVDHANFDTDNLQRELMPLSDGRQFSSTSQSHSAAIVAVSCSLSDWISRPNEALTMPKQSALVTNSAFSDTLDKSMTKNPGVVYEKQPSSSDANKVIHGSNMIKVNDHCDVMSAREKFKSASDCCLQACPLQVSDSKFESPDASPDNTSLLRSLGRSTVSRRSDVDLISLFENEELHDKELEEAQEHRRKCEIEERNALNAYRRAQRSLAEANARCTYLYRKREMYSAQLRSLVMEESSLLWSSQHRQTGDAWNLSNNVSEVNLELIPSSSRQFQAEVEAGNQLGYDSNVQSADGDAHYRSSGNEDGHNFGSEACSEPDASTSQLNNSDANGVYSECNNQNLSPDDDDETFSLDHEAGHANVMTLRGEVNTKKDEMNMGTKFLTDGSRDPLVLEAYLRSKLFSRLGVISSSKQGGTYSDSAVGKVSDEDVAGPQTQVVMESVSPSDHEVLNDDHGDGPKEPEGSIFKAPLNSKNLLHVEEHSLNNSPSPTLVPEGSSFHMVDMTSSPIIQSSSIFRSAMKAAGPVSLDSMQVREQHYGSPDMCTDNGSLVNCSQDKLTLSVVSAAVEVAHCVSFDKIDSYTCKSAIDPFWPLCMYELRGRCNDDECPWQHVKDYSRNIIQLESSNSADLQTGSSSPCGKQRACAERSNVLIPPRYLVCLDSLKADSYGSLQARQLALSLRNVFSNSLAVSSSLLKHLPSDEPYLHGNDGCVESYGGSGQSLYFRKRNGTGNPLQNGSANNDHCLEMALLVLNQEISKIEGIKKALVILSRALEADPASLHLWIVYLLLYYSTKSSDSELSKKAAVGEDDFFSCAVKHHEQSYELWLLYINSRRRLNDRLAAYERAISRFCHHASHIDGNMMHHSAAILDLFLQMMHCLCMSGNVPKAVQRICGLVLADRDCDESHSLLLSDILQCLTITDKCIFWVCCVYLVIYRKLPDAMVQQFEFEKDMSIMEWPSVHLTLEKKQQVSKLMEMAIDSVGLHVDNKSHEDEGSTAKSAYLIAVNHIKLMAAIDGEESYTKFLEKYKNLYPSCLELVLLSARAHCVGESANFEGFEAAISNWSKEIPGIQCIWNQFVEYVLENGKPCQAKEILDKWFNLVWKCQFHHNQLIDGKHEDIQSSPVDLSGSDFNALLSSSNKIDAVFALLNLSLYKMFHDDPFEAQLAIDKALRVADPDVFRHFVREHAVFLFNNSSQLRKDISVHGLLDILKAYMSHAWAIPARDPLTRMFVKDIQKPRLRQLVINILNPISTDTCLVNSFLDVWFGSSFLLQKSIELKDLVDFVEAILEVSPANYQLVISVCRFLCQDTVACNTKSASVLFWASSSLVNTLYHAVPVPPEYVWTEAADLLQKLTNVREISESFHQRALSVYPFSIKLWKSFLHLSVSTDKRKSIVEAAKDKGIQLD*

Click here to download the sequence:
Link to NCBI Protein BLAST