Transcript Information: R_Transcript_44720.p2


Annotated TAIR IDAT3G53860.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31600.1); Has 70 Blast hits to 70 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19949850-19951270 | Reverse length=281
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2364380734721
Replicate 26.0712193974838
Replicate 37.1756045481923
Condition 2: 8 Hour
Replicate 16.4902292631252
Replicate 210.506920383208
Replicate 38.3103759466832
Condition 3: 24 Hour
Replicate 17.1916022641001
Replicate 26.1116982467865
Replicate 36.3289748492233


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44720.p2 GENE.R_Transcript_44720~~R_Transcript_44720.p2 ORF type:internal len:83 (-),score=2.76 R_Transcript_44720:3-248(-)
TCACCCGCCCACTCACTCACTCACCAACTCCCAAAACTCAACTCAACTCGCCCAAGACAACTCACAATGGAAGGACCATCATCATCAGCCCCACCAATCGCCGACTTAGAAGACGACGACACAGCCTTGGTCAACTCGGAGTTCCTAACTCGTCAAGAACTCCTGAAACGGCGATCTCGGAGACTGCGTCGACTCGCCAAGTGTTACCGAGACTATTACTGGACCCTCATGGAAGACCTCAAACGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44720.p2 GENE.R_Transcript_44720~~R_Transcript_44720.p2 ORF type:internal len:83 (-),score=2.76 R_Transcript_44720:3-248(-)
SPAHSLTHQLPKLNSTRPRQLTMEGPSSSAPPIADLEDDDTALVNSEFLTRQELLKRRSRRLRRLAKCYRDYYWTLMEDLKR

Click here to download the sequence:
Link to NCBI Protein BLAST