Transcript Information: R_Transcript_44724.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeOrtholog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.6131262780389
Replicate 25.7701071693682
Replicate 37.9487694857855
Condition 2: 8 Hour
Replicate 17.0705696976459
Replicate 28.7865975405479
Replicate 310.319168301828
Condition 3: 24 Hour
Replicate 18.0794908127031
Replicate 27.2371645252099
Replicate 38.3851994165554


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44724.p1 GENE.R_Transcript_44724~~R_Transcript_44724.p1 ORF type:complete len:1219 (+),score=275.46,JmjC|PF02373.18|4e-45,FYRC|PF05965.10|7e-24,JmjN|PF02375.13|3e-16,zf-C5HC2|PF02928.12|3.8e-13,zf-C5HC2|PF02928.12|1.6e+04,FYRN|PF05964.10|8.9e-09 R_Transcript_44724:1248-4904(+)
ATGGGTACTGAACTTGTTCGAGCTTGTTTGAAAGAAGAGGACCTTGATTTTCCAGCAGTTCCACCTGGTTTTGAGTCATTCACATCCTTCAAATTGAAGAAGGTGGAAAATACTGAAAATGAACCAAGTTGCTCAGTTTCCTCAAATACTCATCAAGAATCCCCTGTAAAACCTGAGCCTGGACTTGGTAGTCCGGGAAAGATTTCGAGGTCTGTTAGGCGTAGATCTGGGGTTAATTATGGCCGATTCAACCAATGTTCTGATGAGGATTCTGATTCTGAGCAGCTTAAGAACTTTCCAGTAAAGCCTGGCCTGCCGAAAGGGGTCATCCGTGGCTGTGCTGATTGTCGATACTGCCAAAAGGTAATTGCAAGATGGCATCCAGAAGCTGCATGTAGGCCTGACCTTGTGGAGGTGCCTGTATTCTATCCAAGTGAAGAGGAATTTAGAGATACAATAAAATATATAGAACAAATACGCCCAAAGGCTGAATCATATGGAATTTGTCGAATTGTTCCTCCTCCTTCATGGAAACCTCCTTGTCGTTTGAAAGAGAAAGATATATGGGAAACATCTAGATTTGCTACACGGGTGCAGAAGGTGGACAAACTGCAGAATCGTGATGCCTCAAAAAAGATGTCAAAGGCACACAGTCATGCAAAAAAGAAAAGAAGAAAATGCTCAAGAATGTGGTTAGAAGGTGGGGCTCGTAGTGGAAAGATTTTAGAGCAAGGGGAAACAGGATTTGGTTTTGAACCTGGTCCTGAGTTCACTTTAGACGCTTTTCAAAGATATGCAGATGATTTTAGGGCACAGTATTTCAGAACCGAAAATTGTACAGATTCAAATATTGAAAGGGCCAAGTTTACTCAGAAGGGGGAGCCATCAGTTGAGACGATAGAGGGTGAATACTGGAGAATAGTTGAGAAACCCACTGAAGAAATTGAGGTTCTTTATGGGGCTGACCTAGAAACTGGAGTTTTTGGTAGTGGTTTCCCAAAGCCTTCTGGTCAGGGCAGTTTATCTTATGATGATGAATATGTAAAATCAGGATGGAATTTGAACAATTTACCTGGGCTTCCAGGTTCAGTTCTTTCATATGAAAATGCAGATATATCTGGTGTCCAAGTACCTTGGTTGTACGTAGGAATGTGCTTTTCCTCATTTTGTTGGCATGTTGAGGACCATCATTTGTATTCTCTAAATTATATGCACTTTGGTGCACCAAAAATGTGGTATGGTGTTCCTGCAAGTGGTGCTGTTAAGTTGGAGGATGCAATGAAAAAGTATTTGCCAGACCTATTTGATGAGCAGCCTGACCTCCTTCATAAGTTGGTCACACAACTTTCTCCCTCCATCCTCAAATCAGCAGGGGTGCCTGTATATCGCTGTGTACAGAATGCTGGGGAGTTCGTCATGACTTTTCCTCGGGCATATCATGCTGGGTTCAACTGTGGGTTCAATTGTGCTGAGGCCGTGAATGTTGCTCCTATTGATTGGTTTCCTCATGGACAGAATGCTGTGGAGCTCTACCGTGAGCAAGGGCGGAAAACAACGATTTCCCATGACAAGTTGTTGCTTGGGGCAGCTAGAGATGCTGTAAAAGCTAACTGGGAACTTAATTTGCTGAGGAAAAATACTACTGACAACTTGAGATGGAAGGATTTCTGTGGAAGAGATGGAATCTTAGCAAAATCTCTTAGGGCACGTGTTGAGACAGAGAATGTGAGGAGGGAATTCCTTTGCAAATATTCAAAGGCACTGAAGATGGAAAGCAGCTTTGACTCCGCCACTGAGAGGGAATGTAGTATCTGTTTCTTCGACTTACACTTATCTGCTGCAGGTTGTCACTGTACACCAGATAGGTTTGCCTGTTTAAATCATGCAAAACAGTTGTGCCCATGTGATTGGGATAGAAAATTTTTCCTGTTCCGTTATGACGTTGCAGAGTTGAATCTACTGGTTGATGCATTGGAAGGTAAATTAAGTGCAATTTATAGATGGGCGAGGCTTGATCTTGGACTTGCCTTAAGTTCTTGCATATCCAAAGACAATCTCCAGGTTGCAGGCCTTATTGGTGGACTTTCAGAACATCCAGGAGAAAGTGTTGCAACTAGGTCAAACTCACTAACTTTAGTACATTCAAAAGGCAAAGATAGCATCGCAAAAATCCCAAATGATCTGGGTGTGGGCAAGAATTCTTCACTGCAAATGGTCAAGTTCCCTGAAGCTGTACTTGCCCTAGAAGCAACTAGAGTCCCACCAATTAAATTATCTCGTAATAACAAGCAAAAAAATGACAAGTCACAAGTCAACAAAGATGGACTTGAACTTGCTGTTTTATGTGATGCAAGTGATCCATCACAGCAGCCCATTCAAAGAGACTTATTATGCAACCAGAGGTCCACTTTGGTAGGATCTCAGATGAAGTCATCTTCATCTGGACAAGATGATGTGATATGTCTCAGTGATGATGAAGATGAGCAGTCAAATAAACCGCTATCTGATTCAACTAAAGAAACCCTCTCTCAGAACTGTCGAGATGTTCCCGAGGTGGTGGTGTCTGATCATAAGTTGAATCTGTGTGATCTAGCTAATGCAGCATTGGCTGCTGAAGCCAACTTAAACCTGATATCTGATGGCCAGAAAGATGACTGTATGTCTTGTTCAACATCTCCAAAGGACGAGAATGATGTAAAATGTGAAACAGCTGCCCTGTCTGATGAGCAGAATCTTTCTTGCCATCAAGGTTCTATGGGCTCTAGTATTGAAAAAAGGGATCCCGATGCCTCCACCCCGGACAGTTCTGTTCAAAATGCAATGTGTATGCCCAGTGTAGGGCATAGTATTAAGGTTAGGGATGAAAGCCTTCTACATAGAAATGATACAAAACTATTGGATGATGGAAGAGCGTTTCCAGGTAGCCCATCATGCAGTCAGAGTAGCGTGGACAAACATCATCGCCAGAAAGGTCCACGTATAGCAAAAGTTGTGCGGAGAATCAATTGCAATGTTGAGCCTCTAGAATTTGGGGTTGTGGTACCTGGTGATCTTTGGAGCAACAGTCGGGCCATATTCCCCAAAGGTTTCAAAAGTCGTGTCAGGTACATAAACATTTCAGATCCAACAAACATGTGCAACTATATTTCAGAAATTCTGGGAGGATCTAATGGACCTCTTTTTATGGTGTTTTTAGAGCATTGCCCAAATGAAGTGTTTGCTCATGTGTCGCCAACCAAATCCTGGGAAATGGTTCGTGAACGAGTCAATCAAGAGATTGCAAAGCAACATAAACTGGGAAGAATGAAACTCCCCCCTCTACAGCCTCCTGGCAGCTTGGATGGACTCGAAATGTTTGGTTTTACTTCCCCAGCTATCGTTCAGGCTATTGAAGCATTGGACAAGAACCGTGTGTGCAAAGAGTACTGGAGCTCTCGGCCACTTGCTCAGTTCTCACAGTGCTTTCAATCAAGAGGAAACAATCGAAATCCAGGTTGCAAGTCAGAAGAAGCAAATGTTGGATCTGACATGATATTAAAGAGTCTACTTAAGAAGGCAAACCCAGAGGAGTTACAATCACTGTTGGATATAATGAAAAATAACCACAGCCTCATGACTCGCCTCCTTAATGAGGAGCTCCAAAATCGACCAAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44724.p1 GENE.R_Transcript_44724~~R_Transcript_44724.p1 ORF type:complete len:1219 (+),score=275.46,JmjC|PF02373.18|4e-45,FYRC|PF05965.10|7e-24,JmjN|PF02375.13|3e-16,zf-C5HC2|PF02928.12|3.8e-13,zf-C5HC2|PF02928.12|1.6e+04,FYRN|PF05964.10|8.9e-09 R_Transcript_44724:1248-4904(+)
MGTELVRACLKEEDLDFPAVPPGFESFTSFKLKKVENTENEPSCSVSSNTHQESPVKPEPGLGSPGKISRSVRRRSGVNYGRFNQCSDEDSDSEQLKNFPVKPGLPKGVIRGCADCRYCQKVIARWHPEAACRPDLVEVPVFYPSEEEFRDTIKYIEQIRPKAESYGICRIVPPPSWKPPCRLKEKDIWETSRFATRVQKVDKLQNRDASKKMSKAHSHAKKKRRKCSRMWLEGGARSGKILEQGETGFGFEPGPEFTLDAFQRYADDFRAQYFRTENCTDSNIERAKFTQKGEPSVETIEGEYWRIVEKPTEEIEVLYGADLETGVFGSGFPKPSGQGSLSYDDEYVKSGWNLNNLPGLPGSVLSYENADISGVQVPWLYVGMCFSSFCWHVEDHHLYSLNYMHFGAPKMWYGVPASGAVKLEDAMKKYLPDLFDEQPDLLHKLVTQLSPSILKSAGVPVYRCVQNAGEFVMTFPRAYHAGFNCGFNCAEAVNVAPIDWFPHGQNAVELYREQGRKTTISHDKLLLGAARDAVKANWELNLLRKNTTDNLRWKDFCGRDGILAKSLRARVETENVRREFLCKYSKALKMESSFDSATERECSICFFDLHLSAAGCHCTPDRFACLNHAKQLCPCDWDRKFFLFRYDVAELNLLVDALEGKLSAIYRWARLDLGLALSSCISKDNLQVAGLIGGLSEHPGESVATRSNSLTLVHSKGKDSIAKIPNDLGVGKNSSLQMVKFPEAVLALEATRVPPIKLSRNNKQKNDKSQVNKDGLELAVLCDASDPSQQPIQRDLLCNQRSTLVGSQMKSSSSGQDDVICLSDDEDEQSNKPLSDSTKETLSQNCRDVPEVVVSDHKLNLCDLANAALAAEANLNLISDGQKDDCMSCSTSPKDENDVKCETAALSDEQNLSCHQGSMGSSIEKRDPDASTPDSSVQNAMCMPSVGHSIKVRDESLLHRNDTKLLDDGRAFPGSPSCSQSSVDKHHRQKGPRIAKVVRRINCNVEPLEFGVVVPGDLWSNSRAIFPKGFKSRVRYINISDPTNMCNYISEILGGSNGPLFMVFLEHCPNEVFAHVSPTKSWEMVRERVNQEIAKQHKLGRMKLPPLQPPGSLDGLEMFGFTSPAIVQAIEALDKNRVCKEYWSSRPLAQFSQCFQSRGNNRNPGCKSEEANVGSDMILKSLLKKANPEELQSLLDIMKNNHSLMTRLLNEELQNRPS*

Click here to download the sequence:
Link to NCBI Protein BLAST