Transcript Information: R_Transcript_447260.p1


Annotated TAIR IDAT3G51850.1
Annotated Gene Namecalcium-dependent protein kinase 13
Annotated Gene Symbol(s)CPK13
Annotation TypeHomolog
Chromosome Positionchr3:19232667-19235526 | Forward length=528
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49332326904645
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.20144938595663
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.19718652871079


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_447260.p1 GENE.R_Transcript_447260~~R_Transcript_447260.p1 ORF type:5prime_partial len:111 (+),score=14.07,EF-hand_1|PF00036.28|1.3e+03,EF-hand_1|PF00036.28|5.9e-09,EF-hand_8|PF13833.2|9.9e+02,EF-hand_8|PF13833.2|3e-07,EF-hand_6|PF13405.2|8.5e+03,EF-hand_6|PF13405.2|9.7e-07,EF-hand_7|PF13499.2|3.1e-06,EF-hand_5|PF13202.2|1.4e+03,EF-hand_5|PF13202.2|2.2e-05 R_Transcript_447260:1-333(+)
GTCATTACCTTCACAAACAAATTAAGAAAATCAATTCACAGACAATTAACTTCTGGCAAGGGAACCAGAGATATCAGCCCTGAGACTGGTTTAACTACTGAAAAATTCGTTGATGCTGTTGCAGAACGATTAGAAAAATGTGATGATAATGGCGACGTTCCCCACGATATCACACCTAAAACTGATGACGCAGAGTCTGAAAGTGCCGAAGTTCTTGTAAAGAAATTATTCAATGAATTAGATACTGATAAGAATGGTTCAATTTCTTACGAAGAATTCTGTGCTGGACTTAAAAAATTAGGTGTTACTCCACGACCTAAAACACCCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_447260.p1 GENE.R_Transcript_447260~~R_Transcript_447260.p1 ORF type:5prime_partial len:111 (+),score=14.07,EF-hand_1|PF00036.28|1.3e+03,EF-hand_1|PF00036.28|5.9e-09,EF-hand_8|PF13833.2|9.9e+02,EF-hand_8|PF13833.2|3e-07,EF-hand_6|PF13405.2|8.5e+03,EF-hand_6|PF13405.2|9.7e-07,EF-hand_7|PF13499.2|3.1e-06,EF-hand_5|PF13202.2|1.4e+03,EF-hand_5|PF13202.2|2.2e-05 R_Transcript_447260:1-333(+)
VITFTNKLRKSIHRQLTSGKGTRDISPETGLTTEKFVDAVAERLEKCDDNGDVPHDITPKTDDAESESAEVLVKKLFNELDTDKNGSISYEEFCAGLKKLGVTPRPKTPF*

Click here to download the sequence:
Link to NCBI Protein BLAST