Transcript Information: R_Transcript_44834.p1


Annotated TAIR IDATMG00520.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)MATR
Annotation TypeOrtholog
Chromosome PositionchrM:144294-146312 | Reverse length=672
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2883676459854
Replicate 28.129665100213
Replicate 37.6472188011546
Condition 2: 8 Hour
Replicate 18.2117230006005
Replicate 28.8625446321772
Replicate 37.5539477124476
Condition 3: 24 Hour
Replicate 15.739451806926
Replicate 27.0939933321826
Replicate 36.3394266623636


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44834.p1 GENE.R_Transcript_44834~~R_Transcript_44834.p1 ORF type:complete len:656 (+),score=-30.13,Intron_maturas2|PF01348.17|9.7e+03,Intron_maturas2|PF01348.17|3.4e-14,RVT_1|PF00078.23|6.1e-08,RVT_1|PF00078.23|0.45 R_Transcript_44834:2936-4903(+)
ATGAAAGAGGCGATCAGAATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAGACACATCGCACTTCCGCTCGGGTCGAGGCTGCCACTCGGCCCTAAGACGGATCAAAGAAGAGTGGGGAACCTCTCGCTGGTTTTTGGAATTCGACATCAGGAAGTGTTTTCACACCATCGACCGACATCGACTCATCTCAATCTTTAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTTCATTCAGAAAGTCTTTTCTGCCGGACGACTCGTAGGAGGTGAAAAGGGCCCTTACTCCGTCCCACACAGTGTACTACTATCGGCCCTACTAGGCAACATCTACTTACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTACGAAATTCCGATTGTTCAGAGAATCAGATTGGTTCTATTAAAGACAAGTCGTATTGATGACCAAGAAAACTCTGGAGAAGAAGGAAGCTTCAACGTTCTCCAAGACAACAGAGCCATCATTTTGGATAGGGTAAAAAGCATCCAACGCAAAGCGGCCTTTCATTCCCTTGTTTCGTCGTGGCACACCCTCCCCACAAGCACCCCCCGGCTCAGGGGGGACCAGAAAAGGCCTTTCGTTTTCCCCCCTTCGTCGGCCCTTGCCACCTTCCTTAACAAGCCCTCGAGCCTCCTTTTCGCTGCCTTCCTCATAGAAGCCGCCGGGTTGACCCCGAAGGCCGAATTCTATGGTAGAGAACGCTGTAATAATAATTGGGCCATGAGAGACCTTTTTAAGTATTGCAAAAGAAAGGGCCTGCTGATAGAGCTGGGCGAGGCAGCGATACTAGTTATCAGGTCAGAGAAAGGCCTGGCCCGTAAGCTGGCCCCCTTAAAAACCCATTACTTAATAAGGATTTGTTACGCGCGATATGCCGACGACTTACTATTGGGAATCGTGGGTGCCGTAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCACTTCCTACAATCCGGCCTGAACCTTTGGGTAGGCTCTGCGGGATCAACAACAATAGCTGCACGGAGTACGGTAGAATTCCTCGGTACGGTCATTCGGGAAGTCCCTCCGAAGAGGACTCCCATACAATTCTTGCGAGAGCTGGAGAAGCGTCTACGGGTAAAGCACCGTATCCATATAACTGCTTGCCACTTACGCTCTGCCATTCATTCCAAGTTTAGGAACCTAGGTAATAGTATCCCGGTCAAACAGCTGACGAAGGGGATGAGCAAAACAGGGAGTCTACTGGACGCGGTTCAACTAGCGGAAAGTCTTTCCACAGCTAGAGTAAGAAGTCCCCAAGTGAGCGTATTATGGGAGACCGTCAAGCACATCCGGCAAGGATCAAGGGAGATCTCGTTGTTGCATAGCTCAGGTCAGAGCAAGGTGCCATCGGACGTTCAACAGGCAGTCTCGCGATCGGGCATGAGTGTCCGGAAGTTGTCATTGTATACTCTCGCGGGTCGGAAGGCGGCGGGGGAAGGAGGGGGACACTGGGCGAGATCTATCAGCAGCGAATTCCCCATACAGATAGAAGCGCCTATCAAAAAGATACTCCGAAGGCTTCGAGATCGAGGTATCATTAGCCGAAGAAGACCCTGGCCAATCCACGTGGCCTGCTTGACGAACGTCAGCGACGGAGACATCGTAAATTGGTTCGCGGGCATCGCGATAAGTCTTCTGTCCTACTACAGGTGCTGCGACAACCTTTATCAAGTCCGAACGATTGTCGACCACCAGATCCGCTGGTCTGCAATATTCACCCTAGCCCACAAGCACAAATCCTCAGCGCGGAATATAATCCTAAAGTACTCCAAAGACTTAAATATAGTAAATCAAGAAGGTGGTAAGACCCTAGCAGAGTTCCCCAACAGCATAGAGCTTGGGAAGCTCGGACCCGGTCAAGATCCGAACAACAAAGAGCACTCAACTACTAGTCTAGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44834.p1 GENE.R_Transcript_44834~~R_Transcript_44834.p1 ORF type:complete len:656 (+),score=-30.13,Intron_maturas2|PF01348.17|9.7e+03,Intron_maturas2|PF01348.17|3.4e-14,RVT_1|PF00078.23|6.1e-08,RVT_1|PF00078.23|0.45 R_Transcript_44834:2936-4903(+)
MKEAIRMVLESIYDPEFPDTSHFRSGRGCHSALRRIKEEWGTSRWFLEFDIRKCFHTIDRHRLISIFKEEIDDPKFFYFIQKVFSAGRLVGGEKGPYSVPHSVLLSALLGNIYLHKLDQEIGRIRQKYEIPIVQRIRLVLLKTSRIDDQENSGEEGSFNVLQDNRAIILDRVKSIQRKAAFHSLVSSWHTLPTSTPRLRGDQKRPFVFPPSSALATFLNKPSSLLFAAFLIEAAGLTPKAEFYGRERCNNNWAMRDLFKYCKRKGLLIELGEAAILVIRSEKGLARKLAPLKTHYLIRICYARYADDLLLGIVGAVELLIEIQKRIAHFLQSGLNLWVGSAGSTTIAARSTVEFLGTVIREVPPKRTPIQFLRELEKRLRVKHRIHITACHLRSAIHSKFRNLGNSIPVKQLTKGMSKTGSLLDAVQLAESLSTARVRSPQVSVLWETVKHIRQGSREISLLHSSGQSKVPSDVQQAVSRSGMSVRKLSLYTLAGRKAAGEGGGHWARSISSEFPIQIEAPIKKILRRLRDRGIISRRRPWPIHVACLTNVSDGDIVNWFAGIAISLLSYYRCCDNLYQVRTIVDHQIRWSAIFTLAHKHKSSARNIILKYSKDLNIVNQEGGKTLAEFPNSIELGKLGPGQDPNNKEHSTTSLV*

Click here to download the sequence:
Link to NCBI Protein BLAST