Transcript Information: R_Transcript_44909.p1


Annotated TAIR IDAT5G42940.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17216649-17219171 | Reverse length=691
E-Value1.6E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.266458867709
Replicate 219.956593655656
Replicate 322.402600317558
Condition 2: 8 Hour
Replicate 119.871609792125
Replicate 224.69847058937
Replicate 329.861521735877
Condition 3: 24 Hour
Replicate 127.694631277437
Replicate 221.812560030709
Replicate 327.005874971316


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44909.p1 GENE.R_Transcript_44909~~R_Transcript_44909.p1 ORF type:complete len:727 (+),score=159.60,zf-RING_2|PF13639.2|6.5e+03,zf-RING_2|PF13639.2|9e-12,zf-rbx1|PF12678.3|1.5e-08,zf-C3HC4|PF00097.21|2e+03,zf-C3HC4|PF00097.21|4.7e-06 R_Transcript_44909:454-2634(+)
ATGCAAGGGCAGAAGAGTGCTATTGGCTCGCTACCTGATTCGATAAATTTTGATTATGCGTCCTCATCGAGCAATGTGGGTGTAGACCAGCAAATTTGCTGGAACAATCTAAGAAATCCTGCTGAAAGCAGATTGTCTGATTTTAGGATGTCAGCTAGCAGTTCAGATGCTTTTATGGGCACTGTTGCTCAAGAAGGGCAAGGCTTGAGAAAGTGGAGTACCGGTGAATCAAGTTCTAGCAATCCACAAAACCAGGTTGGCCATAATGAACGAATGTCTCCAAGTGGATGGCCACCTTCAATAACTGCATCTGATGGTGCTGGTTTGAGGTTGGAGGAGCAACATGGTAATGCTACCAATCTTGCTTCACAGCCTGGTATTAATTTGAACCTTAGCAGCAATCAAATTGTTAGTGGCCCTGCATTTGTGCAAAGTTCAAACTCCAGTCCGGCTTCACAATATCAAGATGTAAATGAAGGAAGGTTTAATAGAGTTGGTGGTGATTTAGATTGTCCCAATTCTTCTAAAGGTATAGGATTTGAAAGTAAATTCATTTCTTCATCTAGTAGTTCATCTGATCCCTTTGCTTCGTCATCTGGAAGTGGTGGTTTGCTTGTGGAAGAGGATGATGGTAGGCCTGGTTGCTCGTTGGATAGTCGCCGTCAGTCATGTAAGAGGAAAAATCTTGAAAGAAATGGTGGACAGTCTTCTAGTGATGGAGGGTCCTTGTCAAGGGCAGAAAGTGGCATGTGGCATGCCGCTCCTCCCCGGTACAATGCTGGTAGTAGTGTAATTGGATCTGCCACATCTGAAAGTTCTTCTAGTATTAGCCCGCCTGAACAAGTCAATGCGAGACTTGGATTATACATGGGTGTGGGAGTTTCTGCTGATAATCTTCGCTCTTTGAATGGGCATGGACGACCAGATATTTCGCACAGGAATCACCGTTTGAGGATGAATCAGTCAGCTCAGCAAGAATCTATGCCAAATAATTCCATTTTGCCTGCTCCAACTTCTGGCGGTGGGCATCCTGACATTCGTTCTTTACGTCAGCCATTGAGATTTTTAAATCCTCCTATAGACTTAATGTCACCAATTCCGCCTGACAACTCAGTTCCATTGAGTCAGTCTGTAACATTGCGTGTACCTACTTTGCGGCGCAATATGCAAGCTGTCAGGTGGAATGGGGGTCCTAATGTGAGACCTGGAAATTCATCTGGTTCTGCCTTATCTGGAGAGAGAGATGGCACAGAAGATTTGAACTCTAGGAATGTACCAAGAAATATTGCAGAACACCCTATGTTTGTGCCTCCAGTTGAGGCAAGTGTTTCAGCTCAAAATCCATTAAACTGGAGTCCGAGTAATGGTAATGTAGGTACGTCTAGAAACATGGCATCAAGTTCTCGTACTGGGTCAGGTTCTGGTTCCCACTCCTCACCCGGGCCTAGTTGGGTTTCACATCGCCATCCTCCGTCACAGTACTCAAGGAGATTGTCTGAGTATGTTCGTAGATCATTGTTGTCTCCTGTTGGATCTGATGTCGCAGGTCAGAGTAGCACCAATAGCCAAAATCACTTGGGTCCATCTTCCTCACAAGAAGGCATACTTCCCCCTGGTGGAGCCCAGGGACATAGTCAATCACACTCTAGGTCAGCCATGTGGCTTGAAAGGCAAGGTGATGGTGCGGTTGGACTTCCTTATTCCTTGCGAGCTTTAGCAGTGGCTGGTGAAGGAAGAAGCAGACTCATTTCTGAGATCAGCAATGTCCTGGATATTATGCGCAGGGGTGAAGCATTACGATTTGAGGATTTTATGCTCCTTGACCAGTCTGTATTTTTCGGAATGGCTGATATTCATGATCAGCATCGGGACATGCGGCTTGATGTTGATAACATGTCTTATGAGGAGTTATTGGCTCTGGAAGAGCGCATTGGAAACGTGTGCACTGGGTTGAGTGAAGAGATGATCTTGTCACGTATGAAGCAGTGTAAGCATATACATACTATGAGCGATGAACAGATGGAGGCAGAGCCTTGCTGTGTTTGTCAGGAAGATTACAATGATGGGGACGAACTTGGAACCCTGGATTGTGGACATGATTTCCACACCCACTGTATTAAACAGTGGCTGGAGCAGAAGAATTTGTGCCCTATCTGTAAAACAACAGCCCTAGCCACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44909.p1 GENE.R_Transcript_44909~~R_Transcript_44909.p1 ORF type:complete len:727 (+),score=159.60,zf-RING_2|PF13639.2|6.5e+03,zf-RING_2|PF13639.2|9e-12,zf-rbx1|PF12678.3|1.5e-08,zf-C3HC4|PF00097.21|2e+03,zf-C3HC4|PF00097.21|4.7e-06 R_Transcript_44909:454-2634(+)
MQGQKSAIGSLPDSINFDYASSSSNVGVDQQICWNNLRNPAESRLSDFRMSASSSDAFMGTVAQEGQGLRKWSTGESSSSNPQNQVGHNERMSPSGWPPSITASDGAGLRLEEQHGNATNLASQPGINLNLSSNQIVSGPAFVQSSNSSPASQYQDVNEGRFNRVGGDLDCPNSSKGIGFESKFISSSSSSSDPFASSSGSGGLLVEEDDGRPGCSLDSRRQSCKRKNLERNGGQSSSDGGSLSRAESGMWHAAPPRYNAGSSVIGSATSESSSSISPPEQVNARLGLYMGVGVSADNLRSLNGHGRPDISHRNHRLRMNQSAQQESMPNNSILPAPTSGGGHPDIRSLRQPLRFLNPPIDLMSPIPPDNSVPLSQSVTLRVPTLRRNMQAVRWNGGPNVRPGNSSGSALSGERDGTEDLNSRNVPRNIAEHPMFVPPVEASVSAQNPLNWSPSNGNVGTSRNMASSSRTGSGSGSHSSPGPSWVSHRHPPSQYSRRLSEYVRRSLLSPVGSDVAGQSSTNSQNHLGPSSSQEGILPPGGAQGHSQSHSRSAMWLERQGDGAVGLPYSLRALAVAGEGRSRLISEISNVLDIMRRGEALRFEDFMLLDQSVFFGMADIHDQHRDMRLDVDNMSYEELLALEERIGNVCTGLSEEMILSRMKQCKHIHTMSDEQMEAEPCCVCQEDYNDGDELGTLDCGHDFHTHCIKQWLEQKNLCPICKTTALAT*

Click here to download the sequence:
Link to NCBI Protein BLAST