Transcript Information: R_Transcript_44954.p1


Annotated TAIR IDAT1G04730.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)CTF18
Annotation TypeOrtholog
Chromosome Positionchr1:1325385-1331086 | Reverse length=943
E-Value7.8e-309
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.254798979718
Replicate 29.8474384183877
Replicate 314.553350848795
Condition 2: 8 Hour
Replicate 110.269897901427
Replicate 212.127544387007
Replicate 313.819976267795
Condition 3: 24 Hour
Replicate 119.352862291122
Replicate 212.508612738561
Replicate 314.086818202414


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_44954.p1 GENE.R_Transcript_44954~~R_Transcript_44954.p1 ORF type:complete len:968 (+),score=198.92,AAA|PF00004.25|1.1e+03,AAA|PF00004.25|1.3e-13,Rad17|PF03215.11|5.4e+02,Rad17|PF03215.11|0.00084,Rad17|PF03215.11|0.5,RuvB_N|PF05496.8|4e-06 R_Transcript_44954:164-3067(+)
ATGGAGATTCCGGACCTGGACGAGCTCCAGTGGCTGGAGGCCTGCTCTAATGTGCAGGAGGAGGTGGAGCACGAGGATGATGATTATATAGTGGAAGATGAAGGAGTAGTAGTTGAAGGAGGAATTTGTAGACCTGAATCTGAAGGCAAAGATGAATATGAAGACGAGGGACATTTACATTTGTTTGAATCCAACAGCAACAACAGCAAGAAGCGCCCTCGATCTCATTCTCTGGACTTGGAAGCTTCGAAATTGGTGGTGGATCCAGACTTGGACCAAGATATTAGGGTTAGGGTTAGACTCCAAGATAAGTATAACGACGAGGATGACTGGCTACGACTACCACCACAAGATGTAGAAGAAAGCCGCACCAACCGCAATAAGTATTTGTCAAATTATGCCTCTGAAATAGACGGCGATTGCATGCCCATCACTTCACCCGCTGGCTCTGGTGAAAGGGTTTATGCTTTGCTTAACAATGAGCTTTTCACTTCCGTCAACAATTTTAACATGCTTGCCAATTCCACCGGTCTTGTTGCTGAACCAGTTAGTTCTTTGTTGCAAAAAGCTGAACAGAATGCCTTGATGAAGGCTTTACATGCTAGTTCCGAAGTCCAAAATGACTTATTACTTCCTGAAACATCAGCTGTGACTGAGGAACTTTGGGTAAACAAATATGCTCCAAAATCTTTTACCGAGCTCCTCAGTGACGAAAATACAAATCGAGAGGTTCTTGTCTGGCTGAAACAGTGGGATTCTGCTGTCTTTGGAACTGATATTAGAAACACTGGAGATAAGGTCTTATCTGCTCTAAGAAGACATTCCACCATTCCCCACCACCAAAAATACTCTGACACAAGTTTTGCAAGGAGAAGTAAGGGTCCTAGATTGACTGAAAAGTATATGGGTCATTCAAGTAAATCACAGCAGGAAGATATTAAATCAAAAGGTGCTCTAGGTTTGCAAAGTAAGAAAACAAACGGCTCAGGGGCTCCTGATCAGAAGGTTCTCTTGCTTTGTGGCCCCCCTGGACTTGGAAAGACTACTCTTGCGCATGTGGTCGCAAGACATTGTGGATATCATGTTGTGGAGATAAATGCTAGTGACGACCGCTCATCAACTACAATGGAAGCAAAGATATTAGATGCAATGCAGATGAATTCAGTCATGGCTGACTCAAAACCCAAATGTCTGGTACTTGATGAAATTGATGGAGCACTTGGGGAAGGAAAAGGTGCAGTGGAAATCATTGTAAAGATGGTTACTGCTGAAAGGAAGCCCTATGCTGGGAAGGAGATTTCTACTATTGAGGGCCAATCTGGAAAGAGCTCCTTGAAAAAGGGGCATAAAACAGTGTCACTGTCACGACCTGTTATTTGCATATGTAATGACCTTTATGCTCCTGCATTAAGGCCTTTGCGGCTTAAAGCAAAGGTTCACGTGTTTGTTCAACCATCTGTCAATCGTGTCGTAAGCAGGCTTAAATACATATGTAGCAAGGAGGGATTGAAGACAAGTTCCATTGCGTTGACTGCACTTGCTGAATATACAGAATGTGATATTCGTTCGTGCTTGAACACACTTCAGTTTCTTCAGAAGAAGAAGGAATCCCTCAATCTAGCTGCATTAAGTTCCCAAGTGATTGGTAGGAAGGACATGACCAGAAATGTATTTGATGTCTGGAAAGAGGTTTTCCAGAAGAGGAAATTGAAGCGAAGTCTAAAGCATGATGCGAGTCAAATAAAGACATATGATGCGCATAACTCATTATACTCTTTAGTTTCTTATCGTGGTGATTACGAATTAATTCTTGATGGAATTCATGAGAACTTTTGCCAGCTGCATTCTCATGACCCAATGTTACAGAAGACAGTCCATTGTGTTGATGCTCTTGGTCACTCTGACTTACTCCATCAATGTGTGATGCGGTCACATAATATGTCGCTTTATGTCTATCATCCAGCTATTATCATCACAATATCTCGTCTGTTGGCGGGTGTTGAAAGACCAGTTATCGAATGGCCTAAATCGTTCCAGAGGCATCGCACAGTGCTGCTGGAAAATATGGAGATATTAAGGTCATGGCAATCCAAAGTTCCGCCATACATTTCTAGGCATCTTTCAGTGCATTCCTTTGTTGAAGATACTGTTTCTCCGTTGTTGCATATTCTCTCTCCAGCAGATTTGAGGCCGGTTGCTTTGCACCTACAGTCTGATAAAGAGAAGCGTGATCTGGCTCAATTGGTCAGCACTATGATTTGTTATTCTCTCACGTATAGGAAGTGTGATGCACCAACACAACTCTCAAGACATGACGGACTGTTGGACGCGTTGTCTTTGTCATTTGATCCACCAATTCACAATTTTGCTTGCTTCAAGGATTACAAACCGATTCATTATGAACTCAAATCAGCTGTGAAACAAGTTATTTTGCATGAGGTGGAGAAGCAAAAAATAGTACAGGAGGGCACAGGAAGATTCATGCATCATGCTGATGACTCCAGAAAGGAAGACAATGCTGCAATCAGCACAGAAAATGAGATGCCACATACTCCCAAAGGGCACAACACTGTGTCTGTTGTTTCAGGTGTAGAAAGATCAAAGAATATGTCGAAGAACATCAACTGCAAGCCTAGAGGCCAGAAAAGTTCATCACCTTTGCTTTATGGTGGAAATTCAGATATGATGAAGATGAGTGCTGGACATGTGAAGAAGCCTCCCCTGGGTTCCATCAACATCTTAGACAGGTTTAAAATATTGAGCCGCAAGGGTCTCCAAGATGTTGATAGTCCTGCAGAGAAGACAACAGAAAAGAGGGATGGTCATCCTCTATTATTCAAGTTTAATGAGGGCTTTACTAATGCTGTAAAGAAGCCCGTTTGCATCCGTGAATTCTTACTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_44954.p1 GENE.R_Transcript_44954~~R_Transcript_44954.p1 ORF type:complete len:968 (+),score=198.92,AAA|PF00004.25|1.1e+03,AAA|PF00004.25|1.3e-13,Rad17|PF03215.11|5.4e+02,Rad17|PF03215.11|0.00084,Rad17|PF03215.11|0.5,RuvB_N|PF05496.8|4e-06 R_Transcript_44954:164-3067(+)
MEIPDLDELQWLEACSNVQEEVEHEDDDYIVEDEGVVVEGGICRPESEGKDEYEDEGHLHLFESNSNNSKKRPRSHSLDLEASKLVVDPDLDQDIRVRVRLQDKYNDEDDWLRLPPQDVEESRTNRNKYLSNYASEIDGDCMPITSPAGSGERVYALLNNELFTSVNNFNMLANSTGLVAEPVSSLLQKAEQNALMKALHASSEVQNDLLLPETSAVTEELWVNKYAPKSFTELLSDENTNREVLVWLKQWDSAVFGTDIRNTGDKVLSALRRHSTIPHHQKYSDTSFARRSKGPRLTEKYMGHSSKSQQEDIKSKGALGLQSKKTNGSGAPDQKVLLLCGPPGLGKTTLAHVVARHCGYHVVEINASDDRSSTTMEAKILDAMQMNSVMADSKPKCLVLDEIDGALGEGKGAVEIIVKMVTAERKPYAGKEISTIEGQSGKSSLKKGHKTVSLSRPVICICNDLYAPALRPLRLKAKVHVFVQPSVNRVVSRLKYICSKEGLKTSSIALTALAEYTECDIRSCLNTLQFLQKKKESLNLAALSSQVIGRKDMTRNVFDVWKEVFQKRKLKRSLKHDASQIKTYDAHNSLYSLVSYRGDYELILDGIHENFCQLHSHDPMLQKTVHCVDALGHSDLLHQCVMRSHNMSLYVYHPAIIITISRLLAGVERPVIEWPKSFQRHRTVLLENMEILRSWQSKVPPYISRHLSVHSFVEDTVSPLLHILSPADLRPVALHLQSDKEKRDLAQLVSTMICYSLTYRKCDAPTQLSRHDGLLDALSLSFDPPIHNFACFKDYKPIHYELKSAVKQVILHEVEKQKIVQEGTGRFMHHADDSRKEDNAAISTENEMPHTPKGHNTVSVVSGVERSKNMSKNINCKPRGQKSSSPLLYGGNSDMMKMSAGHVKKPPLGSINILDRFKILSRKGLQDVDSPAEKTTEKRDGHPLLFKFNEGFTNAVKKPVCIREFLL*

Click here to download the sequence:
Link to NCBI Protein BLAST