Transcript Information: R_Transcript_45022.p1


Annotated TAIR IDAT1G32410.1
Annotated Gene NameVacuolar protein sorting 55 (VPS55) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:11694398-11695297 | Forward length=140
E-Value8.9E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.156514100381
Replicate 241.242732960585
Replicate 348.10414895192
Condition 2: 8 Hour
Replicate 126.059956265282
Replicate 231.62467574682
Replicate 337.470110494942
Condition 3: 24 Hour
Replicate 130.501086745378
Replicate 228.356761430742
Replicate 327.203290110858


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45022.p1 GENE.R_Transcript_45022~~R_Transcript_45022.p1 ORF type:complete len:140 (+),score=17.42,Vps55|PF04133.10|6.8e-35 R_Transcript_45022:354-773(+)
ATGGCAGATTTACCTCGTTACATGTTGGCATGTGTGCACAGTGGGAAGCTTGCTTTCCTGGCAATTTTGGTGTCCGGAGGAATTGTTTTGCAGATATTGGCATGTGCTTTGTACAACAACTGGTGGCCGATGTTAACAGTTATAATGTATGTCCTTCTCCCTATGCCTATGTTGTTTTTTGCCGGGTCTGATGCCTCTTCACTGTTTACTGAATCATCTGGTAACAGCTGGCTGGAAGCGGCTAAGTTCTTAACAGGAGCTTCAACAGTAGGCAGTATTGCCATTCCGGCTATCCTAAAACACGCTGGTATAATTGGCTGGGGAGCCCTAGCGATGGAGCTTTCTTCTTTCTTTGTATTTGTTTTGGCCATTTTGTGCTTCATCAATATGAACGATGAGGATGGTTATAGTTTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45022.p1 GENE.R_Transcript_45022~~R_Transcript_45022.p1 ORF type:complete len:140 (+),score=17.42,Vps55|PF04133.10|6.8e-35 R_Transcript_45022:354-773(+)
MADLPRYMLACVHSGKLAFLAILVSGGIVLQILACALYNNWWPMLTVIMYVLLPMPMLFFAGSDASSLFTESSGNSWLEAAKFLTGASTVGSIAIPAILKHAGIIGWGALAMELSSFFVFVLAILCFINMNDEDGYSFL*

Click here to download the sequence:
Link to NCBI Protein BLAST