Transcript Information: R_Transcript_45028.p1


Annotated TAIR IDAT4G33210.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)SLOMO
Annotation TypeOrtholog
Chromosome Positionchr4:16015971-16020697 | Reverse length=990
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.031787346407
Replicate 211.717423559096
Replicate 315.849839104424
Condition 2: 8 Hour
Replicate 113.809449423988
Replicate 216.748652638919
Replicate 323.1361572376
Condition 3: 24 Hour
Replicate 118.77749784077
Replicate 215.369215841072
Replicate 319.625687962366


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45028.p1 GENE.R_Transcript_45028~~R_Transcript_45028.p1 ORF type:5prime_partial len:1016 (+),score=196.93,LRR_4|PF12799.3|4.5e+02,LRR_4|PF12799.3|8.5e+02,LRR_4|PF12799.3|5.7,LRR_4|PF12799.3|7.5,LRR_4|PF12799.3|12,LRR_4|PF12799.3|5.1e+02,LRR_4|PF12799.3|6.2,LRR_4|PF12799.3|9.9e+02,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|21,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|5.7e+02,LRR_4|PF12799.3|27,LRR_4|PF12799.3|65,F-box|PF00646.29|5.8e-09,F-box|PF00646.29|2.2e+03,F-box|PF00646.29|8.5e+03,F-box|PF00646.29|6.6e+03,F-box|PF00646.29|9.3e+02,F-box-like|PF12937.3|6.2e-07,F-box-like|PF12937.3|6.3e+03,F-box-like|PF12937.3|7.4e+03,LRR_8|PF13855.2|1.9e+02,LRR_8|PF13855.2|88,LRR_8|PF13855.2|8.2e+02,LRR_8|PF13855.2|7.1e+02,LRR_8|PF13855.2|0.36,LRR_8|PF13855.2|23,LRR_8|PF13855.2|9.7,LRR_8|PF13855.2|0.04,LRR_8|PF13855.2|30,LRR_8|PF13855.2|1.5e+02,LRR_8|PF13855.2|1.2e+02 R_Transcript_45028:2-3049(+)
GAGGCTGAGAAATTGGAGGGTCAAGAAGGAGAAGAAGATGGGGAAAAGGAGGAATCTCTATCATCATCTTCATCATCATCATCATCGTCATCAGAATCTTGTGAAGAAGAAGAAGATTTGGAATTAGGGTTTTACTTAGGGCTACAGCGACAAACAAGTGTTGGTTCAAAGAGGGATCTTGAAGGGTGTTCTATTGTGGAGAGACAAAAGAGTGTTCTTGAAGCTTTGGAGCTTTCTATTGGTGGTAGTACTAGTAATACTAGTAATTGTTGTCTTCATCATTTGCCTTGTTTGGATGATTTTGGGAATGGGAATGTGAATCAGAATGGGAATGGGAATGGGAATGTGAGTTCCTCTTCTGGGGTTCTTGATTTTGGAGAGCTGCCTTTAGGGGGTGTGGATTTTGACTGGGATTTGCAGTTCAAACGTGCCAAATTTGATTCTTCTTCTCAAGAATGTCATCATGCAACAGATGGACCCCCTTGTGCTGATAGTAATGGTTTGGATGTAATAGGAAGCCACAGTAGCTCTCAGAGTTCTTCTGTTTATTCAAGGAATAAGTCTCATTACCTTCCGTCTTCAATGGAAAGTTATGTAAATAATGTCAGCCATAATAACAGTGAAGATGCTGAGGAGGAATGTATCAATAATTCAGATATTGATGGCATGGAGATTCAGATGGATCTTTCAGATGATTTGCTGCATATGGTATTTTCTTTTCTAGGCCACGCTGACCTTTGTCGAGCTGCAATGGTCTGCAAGCAGTGGCGAACTGCTAGTGCTCATGAAGATTTTTGGTGTTACTTGAACTTTGAAAATCGGAACATTTCTTTGGCACAATTGGAAGATATTTGTCATCGGTATCCAAGGGCCATTGAAGTGAATCTTTGTGGTAATTCAAATATGCACATGCTTGTCGTGAGAGCAGTTTCGTTGCTGAGAAATCTTGAGTCTTTGACCTTAGGTAAAGGGCAAATAGGGGAAGCATTTTTCCATGCTGTGTCAGATTGTGCCTTGCTGAAGACTTTAATCGTTTGTGATGCTGCTCTTGGGAATGGTGCACAAGAGATATCTATTAACCACGAGAGGCTACAGCAACTTCAAGTTACGAAATGTAGAGTATTGCGTGTATTTGTAAGGTGTCCACAGCTTCATACTTTGTCTTTGAAGCGTAGTAACATGGCACATCTGGGGCTTAACTGCCCTCTTCTGCATGAACTGGACATTGGTTCTTGTCACAAGCTCCCTGATACTGCAATCCGTTCTGCTGTGACATCATGCCCCCTGTTAGAGTCCTTGGACATGTCAAACTGTTCATCTGTGAGTGATGAAACACTTCGTGACATAGCTTCAGTTTGTGCAAATTTGCACACTCTTGATGCTTCATATTGTCCCAACATTTCTCTTGAGTCCGTGAGAATGCCGTTGCTAACTATTCTGAAGCTTGAAAGTTGTGAGGGCATAACTTCAGCTTCAATGACTGCGATTGCCTATAGCAACATGTTGCAGGTTTTAGAGCTGGTTAATTGTAGTTTACTGACATCAGTTTCCTTGGACCTTCCTCACCTGAGGAACTTGAGGCTGGTGCATTGTCGCAAATTTGTTGACTTAAATCTACGATGTCTTATGCTGTCAGCTCTGACTGTTTCAAATTGCTCTGCACTTCATCGTATCAGTATCACTTCAAATGCGTTAAAAAAACTGACGTTGCACAAGCAAGAAAGTTTGAACTCTTTGTCATTGCAATGCCAATATCTTGAAGAAGTGGATCTTTCGGATTGCGAGTCTTTGACAAATTCTGTCTGTGAGGTCTTCAGTGATGGAGGTGGATGCCCAATGCTGAAATCATTGGTTCTTGATAACTGTGAGAGCCTTACCGCCATTGAACTCCACAGTACATCCCTTGTCTGCCTTTCGTTGGCTGGATGCCGTGCCATCACATCTCTTAATCTCACTTGCCCTTATCTTGATCAAGTTCGCTTAGATGGTTGTGATCATCTGGAAAGAGCATCATTTCTCCCGGTTGGTTTGCAATCACTTAATCTTGGCATTTGCCCAAAACTGAATGCTCTCCTTATTGAAGCCCCTCACATGGATTGTCTTGAGTTGAAGGGGTGTGGTGTACTATCCGAAGCCTCAATTAATTGCCCTCTTTTGAAATCTCTGGATGCGTCCTTCTGCAGCCAACTTCAAGATGATTGCTTGTCTGCGACAACTGTGTCATGTCCTCTTATTGATAAGTTGATTTTGATGTCTTGCCCCGCTATTGGTTTTGATGGGCTGTCCTCGCTGGGTCGGCTTGAAAATCTCACTTATCTTGATTTGTCCTACACTTTCTTGATGGATCTGCAGCCGGTTTTTACATCCTGCTTGCGACTCACGGTACTGAAGCTGCAAGCATGCAAGTATCTGAATGATTCATCACTGGAGGTGCTCTACAAGGAGGGTGCGTTGCCTGCCCTCCGTGAGTTGGATTTGTCTTATGGAACTCTCTGCCAGTCTGCTATTGAGGAGCTGCTCGCCTATTGTACACATTTGACTCATGTGAGTCTGAATGGTTGCATAAATATGCATGACCTTAACTGGGGATTCACAGAGCCATCAAGCTATCAGGCTTCTAGCTTTTCTTCTCAGATTATGGATGAGCCTAGCAGGCTGCCTCATCGCTTACTTCAGATTCTAAACTGTGTTGGTTGTCCAAATATCAAGAAAGTCTACATACCATCTGTAGCGCATTGTATGCATTTGTCCTCCTTAAATGTTTCTCTCTCAGTTAATCTGAAGGAAGTCGACATATCTTGTTCCAATTTGTGTTTCCTAAATTTGAGTAATTGTAGTTCGCTGGAAATCCTGAAGCTGGACTGTCCAAAACTGAGTAGTTTATTTCTCCAGTCATGCAGTATTGAAGAGGAAGCCGTGGAATCTGCAATATTGGGATGTAACATGCTGGAAACACTTGATGTGCGCTTCTGCCCAAAGATTTTCTCACTGGGTGGCTTCCGGGCCGTATGTCCTAGCTTGAAGCGCATCTTCAACAGCCTGCGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45028.p1 GENE.R_Transcript_45028~~R_Transcript_45028.p1 ORF type:5prime_partial len:1016 (+),score=196.93,LRR_4|PF12799.3|4.5e+02,LRR_4|PF12799.3|8.5e+02,LRR_4|PF12799.3|5.7,LRR_4|PF12799.3|7.5,LRR_4|PF12799.3|12,LRR_4|PF12799.3|5.1e+02,LRR_4|PF12799.3|6.2,LRR_4|PF12799.3|9.9e+02,LRR_4|PF12799.3|0.23,LRR_4|PF12799.3|21,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|5.7e+02,LRR_4|PF12799.3|27,LRR_4|PF12799.3|65,F-box|PF00646.29|5.8e-09,F-box|PF00646.29|2.2e+03,F-box|PF00646.29|8.5e+03,F-box|PF00646.29|6.6e+03,F-box|PF00646.29|9.3e+02,F-box-like|PF12937.3|6.2e-07,F-box-like|PF12937.3|6.3e+03,F-box-like|PF12937.3|7.4e+03,LRR_8|PF13855.2|1.9e+02,LRR_8|PF13855.2|88,LRR_8|PF13855.2|8.2e+02,LRR_8|PF13855.2|7.1e+02,LRR_8|PF13855.2|0.36,LRR_8|PF13855.2|23,LRR_8|PF13855.2|9.7,LRR_8|PF13855.2|0.04,LRR_8|PF13855.2|30,LRR_8|PF13855.2|1.5e+02,LRR_8|PF13855.2|1.2e+02 R_Transcript_45028:2-3049(+)
EAEKLEGQEGEEDGEKEESLSSSSSSSSSSSESCEEEEDLELGFYLGLQRQTSVGSKRDLEGCSIVERQKSVLEALELSIGGSTSNTSNCCLHHLPCLDDFGNGNVNQNGNGNGNVSSSSGVLDFGELPLGGVDFDWDLQFKRAKFDSSSQECHHATDGPPCADSNGLDVIGSHSSSQSSSVYSRNKSHYLPSSMESYVNNVSHNNSEDAEEECINNSDIDGMEIQMDLSDDLLHMVFSFLGHADLCRAAMVCKQWRTASAHEDFWCYLNFENRNISLAQLEDICHRYPRAIEVNLCGNSNMHMLVVRAVSLLRNLESLTLGKGQIGEAFFHAVSDCALLKTLIVCDAALGNGAQEISINHERLQQLQVTKCRVLRVFVRCPQLHTLSLKRSNMAHLGLNCPLLHELDIGSCHKLPDTAIRSAVTSCPLLESLDMSNCSSVSDETLRDIASVCANLHTLDASYCPNISLESVRMPLLTILKLESCEGITSASMTAIAYSNMLQVLELVNCSLLTSVSLDLPHLRNLRLVHCRKFVDLNLRCLMLSALTVSNCSALHRISITSNALKKLTLHKQESLNSLSLQCQYLEEVDLSDCESLTNSVCEVFSDGGGCPMLKSLVLDNCESLTAIELHSTSLVCLSLAGCRAITSLNLTCPYLDQVRLDGCDHLERASFLPVGLQSLNLGICPKLNALLIEAPHMDCLELKGCGVLSEASINCPLLKSLDASFCSQLQDDCLSATTVSCPLIDKLILMSCPAIGFDGLSSLGRLENLTYLDLSYTFLMDLQPVFTSCLRLTVLKLQACKYLNDSSLEVLYKEGALPALRELDLSYGTLCQSAIEELLAYCTHLTHVSLNGCINMHDLNWGFTEPSSYQASSFSSQIMDEPSRLPHRLLQILNCVGCPNIKKVYIPSVAHCMHLSSLNVSLSVNLKEVDISCSNLCFLNLSNCSSLEILKLDCPKLSSLFLQSCSIEEEAVESAILGCNMLETLDVRFCPKIFSLGGFRAVCPSLKRIFNSLR*

Click here to download the sequence:
Link to NCBI Protein BLAST