Transcript Information: R_Transcript_45077.p1


Annotated TAIR IDAT1G61000.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22471096-22474046 | Reverse length=440
E-Value7.7E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.60814007256
Replicate 211.28017945616
Replicate 313.547551354835
Condition 2: 8 Hour
Replicate 17.0749226032672
Replicate 28.126641030318
Replicate 310.407469746226
Condition 3: 24 Hour
Replicate 118.190045907278
Replicate 216.329853083768
Replicate 317.589216407529


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45077.p1 GENE.R_Transcript_45077~~R_Transcript_45077.p1 ORF type:complete len:443 (+),score=106.66,Nuf2|PF03800.10|6.2e-27,Nuf2|PF03800.10|3e+03,Nuf2|PF03800.10|4.7e+03 R_Transcript_45077:142-1470(+)
ATGGCGGCAACAGCAGGTTACTCGCTTCCAACACTACCTCGCCATGAAATCGTCAAGGTTATGTCTGATTACCAGATTCTCAATCTCTCCGAATCCGACCTCGTAAACCCTACCCCTAATTTCGTCTTCAATCTCTACACTTCTCTCTTAATGCACCTCGATTCTCTCCAGGAAGATCCAAGCCAGGTGGACTTTGCGGCGTTGGAGAGGTTCGAGAATCCAGATATGCATGTGGATTCGGTTAGGGCAATGAATTTGTTTAGTAAGATAAGAGACTTTTTGGCCACAATTGAGTCCCCCTTTGCCTTCACCTTTGATGATTTGATTCGCCCTGACTCCAATCGTACTCTCAAGTTCCTCTCTGCCTTCCTTAACTTCTTCTTTCACAAGGATACAAAATTGAGCATGTTGAGGCCATATGCGGAGGAACTTAGTGCACTTGATGAGCAGCGGAAAGAGAGGGAGGCTAGAATTTCTCAGTTGAAGGAAGAACTTGCAGGACTAAATGAAGCCAGGGAAAGGGAGAAACCTCTTGTCCTAGAAGCAGAGGCAAAGGTAAAGGAATTGCGACAAACAATTGATAACCTCAATAGCCTTCAATCGAACTTGAGGAAGGAGCGTCAGTCAATGAAGGAAAAGGCACAAGAAATGCATGCAAATCTTTCTAAAGCAGAGTTTGAACTCATCCAAGCTACAGAAGAAAATGCCATTTTACGTTCTAAAATAGTTCAGTCACCAGACAAACTTCAGAGGACTTTAGAGGAGAAGAAAGTAGTTCAGATGGAGGCAAAGGACTCAGAAAGACTGGCCATGCAAAACTTTCAAGAAAAGACCTCCATTTTGGAGGTCTATACTAAGGCGTGGGAGAAAATGACAAAGCAGTTGGCTCAGATGCAAGCGATACAAGAACAGGCAAATTCTGCCAAAGCTGTTGAAAAGGATGTTAAGCAACTGAAGACTAAGTTAAGTGATGAGCAAATGCTAGACATATCACTTGAAGCCGAAGTAGTTGAATTACAAGCCAGAGCTGAACAGTTAGATGTACACAAAAGTCAGTTAGAGAAGGATGGAAAACTCAGGCGAGAGGAGGATACAAAGGGACTGAACAATGTGAAGTTAGAGGCAGAATCAAGGAGCTGTGATCTGGAAGCAAGGGGAAGGAAGATTGAAGCTGTGCTAACTGAGGTGGATGCGATAAAAGCAAAGATTGATTCAACGAAGGAGTTGACCGCTGCAACACTACAACAGTTGCTGATAAAAAGCAAAGATATAGTGAAGGAGTTTAATCAGTACTCAGGCTCTATTGTACAATCAAGCATGGAGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45077.p1 GENE.R_Transcript_45077~~R_Transcript_45077.p1 ORF type:complete len:443 (+),score=106.66,Nuf2|PF03800.10|6.2e-27,Nuf2|PF03800.10|3e+03,Nuf2|PF03800.10|4.7e+03 R_Transcript_45077:142-1470(+)
MAATAGYSLPTLPRHEIVKVMSDYQILNLSESDLVNPTPNFVFNLYTSLLMHLDSLQEDPSQVDFAALERFENPDMHVDSVRAMNLFSKIRDFLATIESPFAFTFDDLIRPDSNRTLKFLSAFLNFFFHKDTKLSMLRPYAEELSALDEQRKEREARISQLKEELAGLNEAREREKPLVLEAEAKVKELRQTIDNLNSLQSNLRKERQSMKEKAQEMHANLSKAEFELIQATEENAILRSKIVQSPDKLQRTLEEKKVVQMEAKDSERLAMQNFQEKTSILEVYTKAWEKMTKQLAQMQAIQEQANSAKAVEKDVKQLKTKLSDEQMLDISLEAEVVELQARAEQLDVHKSQLEKDGKLRREEDTKGLNNVKLEAESRSCDLEARGRKIEAVLTEVDAIKAKIDSTKELTAATLQQLLIKSKDIVKEFNQYSGSIVQSSMEC*

Click here to download the sequence:
Link to NCBI Protein BLAST