Transcript Information: R_Transcript_45133.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeOrtholog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6.8E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8170368371213
Replicate 20.47502942118321
Replicate 31.8657071345283
Condition 2: 8 Hour
Replicate 10.99716192092854
Replicate 20.80944368655875
Replicate 32.0533496176908
Condition 3: 24 Hour
Replicate 11.4543407293568
Replicate 21.5967608246572
Replicate 32.0798271421939


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45133.p2 GENE.R_Transcript_45133~~R_Transcript_45133.p2 ORF type:5prime_partial len:221 (+),score=20.34,RVT_1|PF00078.23|4.4e-18 R_Transcript_45133:3-665(+)
GTCAAGGAGGCTATCTTCTCTCAAGGGAGCTGCAAAGCTCCAGGGCTTGACGGTTTTCATGCCCTCTTCTACCAAAAATTCTGGGACTTTTTGAGGCATGACCTTATTGCTTCCACCTCCTCTCTCTTTTCCTCAGGCTCCTTTCCCCCGGCCTTCAATCACACCTTGATCAGTCTCATCCCCAAATGCCCAAACCCAGAGTCAGTTAAACAACTAAGACCCATAAGTCTCTGTAACACCAATTACAAGGTGATTTCCAAGATCCTAGTTAGTAGGATTCGGCCATTTCTGGGAACCCTCATTTCCCCTAACCAAAATAGCTTCATCCCGGGGAGAGGATCGGATATCAATTACATTGTAGCTTCCGAAATCATCCACTCTATGGGTAAAAAGAAAGGGAAAAAGGGTTGGTTTGCTCTTAAAATTGATCTTGAGAAGGCATATGCTAGAATGGAATGGGATTTTATTCGAAATATGCTTTTCTCATTTAACTTTGACCCCCCTCCATTAGACTTATCATGGAATGCATTACTTCTGTCACGACCTAAGTCCTTGTTAATAGAGGTCAAACGGAGGAGTTCCAGCCTTCCCGTGGCCTTAGGCAAGGGGACCCTCTATCGCCTTATATCTTCATTTTGTGCAAGGAATTTCTTTCTAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45133.p2 GENE.R_Transcript_45133~~R_Transcript_45133.p2 ORF type:5prime_partial len:221 (+),score=20.34,RVT_1|PF00078.23|4.4e-18 R_Transcript_45133:3-665(+)
VKEAIFSQGSCKAPGLDGFHALFYQKFWDFLRHDLIASTSSLFSSGSFPPAFNHTLISLIPKCPNPESVKQLRPISLCNTNYKVISKILVSRIRPFLGTLISPNQNSFIPGRGSDINYIVASEIIHSMGKKKGKKGWFALKIDLEKAYARMEWDFIRNMLFSFNFDPPPLDLSWNALLLSRPKSLLIEVKRRSSSLPVALGKGTLYRLISSFCARNFFLN*

Click here to download the sequence:
Link to NCBI Protein BLAST