Transcript Information: R_Transcript_451444.p1


Annotated TAIR IDAT1G32410.1
Annotated Gene NameVacuolar protein sorting 55 (VPS55) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:11694398-11695297 | Forward length=140
E-Value7E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.18100258979567
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.19276622276884
Replicate 30.15647940189989
Condition 3: 24 Hour
Replicate 10
Replicate 20.3802630843203
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_451444.p1 GENE.R_Transcript_451444~~R_Transcript_451444.p1 ORF type:5prime_partial len:116 (+),score=23.51,Vps55|PF04133.10|3.3e-35 R_Transcript_451444:2-349(+)
GCTTTTGCTGCAGGTATTTTGATGAACATCTTGGCATGTGCATTATATGGAAACTGGTGGCCATTCTTTGTCATCGTTGCCTATGTTTTGGCTCCTATTCCTACCCTCTTGTGCAAGGGAAGCAATGATCCCTTCCAAGAAGACACAAACGATGCACAAGACGTGGGATTCTTCTTGACAGGAATCCTCGTGGTGAGTGGATTCGCTCTGCCTGCAGTGTTGACCCATGCTGGTGCAATGTCAGTTTCCGCACTTGGATTGGCTTTGGGAGGTGGAGCAGTGACCTACATCTCCATCATCGTCTTCCTCAAATTCGCACTCACCAAGGAAGATGACATGTGGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_451444.p1 GENE.R_Transcript_451444~~R_Transcript_451444.p1 ORF type:5prime_partial len:116 (+),score=23.51,Vps55|PF04133.10|3.3e-35 R_Transcript_451444:2-349(+)
AFAAGILMNILACALYGNWWPFFVIVAYVLAPIPTLLCKGSNDPFQEDTNDAQDVGFFLTGILVVSGFALPAVLTHAGAMSVSALGLALGGGAVTYISIIVFLKFALTKEDDMWS*

Click here to download the sequence:
Link to NCBI Protein BLAST