Transcript Information: R_Transcript_45153.p1


Annotated TAIR IDAT1G14900.1
Annotated Gene Namehigh mobility group A
Annotated Gene Symbol(s)HMGA
Annotation TypeOrtholog
Chromosome Positionchr1:5138665-5139353 | Reverse length=204
E-Value2.2E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1122.95112463319
Replicate 2147.91775686538
Replicate 3132.29284409463
Condition 2: 8 Hour
Replicate 193.266384461979
Replicate 2123.48734185329
Replicate 3104.83065009976
Condition 3: 24 Hour
Replicate 1147.54905319378
Replicate 2149.18276238346
Replicate 3123.82538550396


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45153.p1 GENE.R_Transcript_45153~~R_Transcript_45153.p1 ORF type:complete len:178 (+),score=45.57,Linker_histone|PF00538.15|7e-11 R_Transcript_45153:1130-1663(+)
ATGGCAACTGAAGAGGTGAATAGACATCACTCTCTCCCTCCCTATCCTGAGATGATCATGACTGCAATTGATGCTTTAAATGAGAAAATGGGTTCGAACAAGACCTCAATTTCCAAATACATCGAATCAAAGTACCAGAACCTGCCAGCAGGCCACTCGACACTGCTAAGACACCACTTGAACAGGATGAAAGACACCGGGGAGTTGATTTTCTGGAAGAATAATTACATGAAACCTGACCCTAATTTCATCCGACGTGGACGTGGAAGGCCCCCCAAGAACAAGGAGCCTGGGATGCTGACTTCTAGCCCACCTGGTCCTGCTAGGCCAAGGGGGCGGCCCAGGAAGGATGAATATGGTCCCGGTGATGCTCCTGGGGATGCTGATGGTGTTCCTATGAAGAAGAAGAAAGCATTAGCCTCGGAGAACAACTATGGCATTGATGGCGGATCAGGCCCTGCACCCACAAAAACCGGAAGGCCTAGGGGAAGGCCTCCAAAGGCCAAGCCTCAAACAGCATTGGAAGGACTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45153.p1 GENE.R_Transcript_45153~~R_Transcript_45153.p1 ORF type:complete len:178 (+),score=45.57,Linker_histone|PF00538.15|7e-11 R_Transcript_45153:1130-1663(+)
MATEEVNRHHSLPPYPEMIMTAIDALNEKMGSNKTSISKYIESKYQNLPAGHSTLLRHHLNRMKDTGELIFWKNNYMKPDPNFIRRGRGRPPKNKEPGMLTSSPPGPARPRGRPRKDEYGPGDAPGDADGVPMKKKKALASENNYGIDGGSGPAPTKTGRPRGRPPKAKPQTALEGL*

Click here to download the sequence:
Link to NCBI Protein BLAST