Transcript Information: R_Transcript_45244.p1


Annotated TAIR IDAT1G60995.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Membralin (InterPro:IPR019144); Has 172 Blast hits to 170 proteins in 70 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22465768-22470575 | Reverse length=623
E-Value1.1E-243
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.545545434954
Replicate 28.7329745094337
Replicate 311.419583049409
Condition 2: 8 Hour
Replicate 19.0648261087884
Replicate 211.906015257622
Replicate 315.153114470706
Condition 3: 24 Hour
Replicate 111.682070049496
Replicate 29.4987250679183
Replicate 313.074513861642


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45244.p1 GENE.R_Transcript_45244~~R_Transcript_45244.p1 ORF type:complete len:678 (+),score=81.31,Membralin|PF09746.5|9.4e-05,Membralin|PF09746.5|1.5e-17 R_Transcript_45244:827-2860(+)
ATGGATCCAGAACAGACGTTCATTAGGGTTCAAGAGAGGTTCTCGCAGGTGGTGACGCCTAGAATCAGAGCTGCTCTTGAATACTTTTATCTCTTCACCGCCATCACTTTGTTCTGTATTCTTGTCGTTATGCACGCCAATTATGTTCAGCAGCCTGGTTGTTCGAGCGAGCTGTCAGGAGTTGAAACACTGAAAGCGCAACTTATTTATATTAAGATAACTGGCATTGGGCTGTTGACACAAAATGATTCTGAAAGTAGCTTTGTAGATATTTCTGATAAGCATACTATAATTGCCAAGCCCCAAGAGCTGGATGGTGATGGGGATGACTTGGATTTGTTCACTGTGAAATACTGGTTCAACTGGGTTAGTTCTGGTGCTAGAAGGGGTAAGCTGAGCTTCAAGTTCTGGAAAGCTTATGATGAACTTTTTAAAACACAATCAGAAACTTCTAGTGATGGAAAAGGCACCAAGATGGTCGGTCCTGATGGTAAAGCAGAGAGAGAAGATCCTTATGGATCTTTTTCCATGTTTTCCAAACAGTCTTTGAAAGTTGTAATCTTTCACTTTCTTAGAAAGTGGCAGAGGCGTGTATCATTTATTTGGAAGCATGGAACACGTCTCTTGAGGAGTCTCTGGAATATTGCAGGTATTAATTTGAATCTTGACATTCCCAAGTGGCTGCACATTCTCTACTTGGATAGACTCAACTCTGTTGCAGTGCAGTGGCTTGACAGGAAAATTAAAGCATTTGAGCCAGCGTATCTCTATACTATGGAGAAGGGGTACTTCTTGCTTCCTAAAAATGCTAAGGCTCGTCATAACATTCGCACAGCTAATATTAGCATATCAGCTCGGCATTCTTGTTTTGGTAACAGGTGGCAGCAACTTCTCATCAATAGAGTGGTGGGATATGACACTATTCTGATGAATAGTCTGCTAGATTCTCCTGGACAAGGATACTTGTATAACTATCAGACAAGGGAGTTTTACAACTTGAGTTATGCCCATGAACCATTGAAAAGTTCTGCTACTTTCGGAGATTACCTTGTTACTAAGTGTGGAGTGCTAATGATGTCACTTTTTGTTTTCTTTACAACCACGATGTCAGTTTCATTTACCTTGAGAGAGACGCAGACCCGTATGCTGAAATTCACAGTGCAGCTCCAACACCATGCTCGACATCGACTTCCGACGTTCCAGTTGATATTTGTTCATGTCATTGAGTCCCTTGTTTTTGTGCCAATTATGATAGGCATCCTATTTTTTCTGTTCGAATTTTATGATGATCAATTGCTGGCTTTCATGGTGTTGATATTAGTCTGGTTATGTGAGCTCTTTACCCTTATCAGTGTTCGCACTCCAATATCAATGAAGTTCTTTCCACGCTTCTTTTTACTCTATTTCCTGGTGTTCCATATCTATTTCTTTTCTTATGCTTACGGTTTTTCATACTTGGCTCTATCTACTACAGCAGCATTTATGCAGCATCTTATCCTTTATTTCTGGAACAGATTTGAGGTGCCTGCTTTGCAAAGATTCTTGCAAACTCGCCGGTCGCAAATGCAACAGCACCCGGACTTCCACATTACTTCCTCAACCATACTGGCCTCTACATTGCACATCACCCGATTGAACACCAGGAATCCTGGTCCGGTCCATATGGAAGCCGTGTCAGGGGCGGAGCCTGGGGCCTCTGGGCTTAGACCTGGTATTAATGTTACATTACCTCCTAATGTGCAGGCAGAAGTACCACCTGGGCTTCGAGAACCATTGCGAAATGGAAATCGACAAAATGAGGTTGCGGGTGGGGAATCTCTTCCGATTCCTGAGCACAATCTTCAACCACCCGAAACTGGTCAGAACCCTGGAAATATGAATTCATTTAGCTCTTTGTTGCTATGGATATTGGGAGGGGCTTCATCTGAAAGTCTCAACTCCTTTTTCTCTATATTTAGAGATATGAGAGATCAAGGCCCATTCTTTGCAGAAAACCCTAGGCGGGAGACAAGTTCTGCCCAGAACCCTCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45244.p1 GENE.R_Transcript_45244~~R_Transcript_45244.p1 ORF type:complete len:678 (+),score=81.31,Membralin|PF09746.5|9.4e-05,Membralin|PF09746.5|1.5e-17 R_Transcript_45244:827-2860(+)
MDPEQTFIRVQERFSQVVTPRIRAALEYFYLFTAITLFCILVVMHANYVQQPGCSSELSGVETLKAQLIYIKITGIGLLTQNDSESSFVDISDKHTIIAKPQELDGDGDDLDLFTVKYWFNWVSSGARRGKLSFKFWKAYDELFKTQSETSSDGKGTKMVGPDGKAEREDPYGSFSMFSKQSLKVVIFHFLRKWQRRVSFIWKHGTRLLRSLWNIAGINLNLDIPKWLHILYLDRLNSVAVQWLDRKIKAFEPAYLYTMEKGYFLLPKNAKARHNIRTANISISARHSCFGNRWQQLLINRVVGYDTILMNSLLDSPGQGYLYNYQTREFYNLSYAHEPLKSSATFGDYLVTKCGVLMMSLFVFFTTTMSVSFTLRETQTRMLKFTVQLQHHARHRLPTFQLIFVHVIESLVFVPIMIGILFFLFEFYDDQLLAFMVLILVWLCELFTLISVRTPISMKFFPRFFLLYFLVFHIYFFSYAYGFSYLALSTTAAFMQHLILYFWNRFEVPALQRFLQTRRSQMQQHPDFHITSSTILASTLHITRLNTRNPGPVHMEAVSGAEPGASGLRPGINVTLPPNVQAEVPPGLREPLRNGNRQNEVAGGESLPIPEHNLQPPETGQNPGNMNSFSSLLLWILGGASSESLNSFFSIFRDMRDQGPFFAENPRRETSSAQNPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST