Transcript Information: R_Transcript_45278.p1


Annotated TAIR IDAT3G44880.1
Annotated Gene NamePheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain
Annotated Gene Symbol(s)ACD1, LLS1, PAO
Annotation TypeOrtholog
Chromosome Positionchr3:16383858-16386204 | Forward length=537
E-Value3.1E-298
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.968861593229
Replicate 23.0327989490208
Replicate 33.3087509861109
Condition 2: 8 Hour
Replicate 13.4915029646998
Replicate 22.4431333863518
Replicate 33.0924966242141
Condition 3: 24 Hour
Replicate 13.5286999998138
Replicate 22.3280551051165
Replicate 33.7695491405212


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45278.p1 GENE.R_Transcript_45278~~R_Transcript_45278.p1 ORF type:complete len:540 (+),score=104.55,PaO|PF08417.8|1.6e+04,PaO|PF08417.8|3.9e-21,PaO|PF08417.8|2.4e+03,Rieske|PF00355.22|7.6e-20 R_Transcript_45278:331-1950(+)
ATGGCCTATTCTCTTTATACCCCAACTCAAACCCCCACTATCACTAAACCCTTTTCGCATTTTCCTTCACTTTCTCCTTTCCACCACTCCAAACCCCAGATCAGTTCTTCCAAAAGACTCTCAAATTTCCCCTATTTAAGAGTCTCAACCCCTTCAAAACCAATTTCCGCTGAACAAGAACAACCCACAATTCTTGATGACCATGATGATGAATTCATTTCCACTGAAACTGCACAACCCAATGAATCCTCAAAGTTCACATGGAGAGACCATTGGTACCCAGTTTCTCTTATTGAAGATCTTGACCCTTCCTTACCAACCCCTTTTCAGCTCCTTGGCAGGGACTTAGTTTTATGGTTCAGCAAATCAAGTAATGAGTGGGTTGCTCTTGATGATAAATGCCCACATCGTTTAGCTCCTCTTTCTGAAGGGAGGCTTGATGAAAATGGGGACTTGCAATGCTCATATCATGGATGGTCTTTTGATGGGTGTGGTTCATGTACTAGAATCCCTCAGGCTAAATCAGATGGCCCTGAAGCTAAGGCTGTCAAGTCCCCTAGAGCATGTGCTACCAAGCTTCCTACTATGGTTTCTCAGGGTTTGCTCTTTGTTTGGCCTGATGAGAATGGGTGGGAGAGAGCTAGTGCTTCTCAACCTCCTAGGTTGCCAGAAGACTTTGATAAGCCTGAGTTTGCTACAGTGTCAATCCAGCGGGATCTGTTTTATGGCTATGATACCTTGATGGAGAATGTTTCTGATCCTTCACACATTGACTTTGCACACCACAAGGTCACTGGAAGGAGGGACAGGGCCAAGCCTTTGCCATTCAAGGTTGCATCCTCTGGTCCTTGGGGCTTTGCTGGAGCAAATGATGATAATCCACGAATAAGCGCAGAATTTATTGCACCCTGTTATTATCTGAATAAGATAGAGATAGACACAAAGCTTCCTATAGTTGGAGACCAGAAGTGGGTAATATGGATTTGCTCTTTCAATATACCAATGGCACCTGGGAAGACCCGTTCAATTGTTTGCAGTGCTCGTAACTTTTTCCAATTCACAGTACCAGGCCCTAATTGGTGGCAGGTTGTACCCAGATGGCATGAACATTGGACGTCAAACAAAGTGTATGACGGAGACATGATTGTGCTTCAGGGTCAAGAGAAATTCTTTCTTTCAAAATCAGCGGAGGGTTCCGAAGATATTAACAAGCAATATACAAAAGTCACCTTTACCCCTACACAGGCAGATCGCTTTGTATTGGCATTTCGTAACTGGCTGAGACGGCATGGCAATGGGCAACCTGAATGGTTTGGTACAGTGAGCCAACAGCCTTTACCATCAACAGTGCTGTCCAAACGACAGATGCTGGATAGATACGAGCAGCACACATTGAAGTGCGCATCATGTAGAGGAGCTCACGAGGCCTTCGAGACATGGAAGAAAGTTCTTGTAGGTGCAACTGTTATCTTTTCTGCAACTGCGGGTATTCCTCCGTCGTTGCAGTTCCGAATTGTCTTGGGTGGGCTTGCAATTTTAAGTGCAGCCTTGGCTTATGCTTTGCATGAGCTGCAGAAGAACTTTGTGTTTGTTGATTATGTACATGCTGAAATTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45278.p1 GENE.R_Transcript_45278~~R_Transcript_45278.p1 ORF type:complete len:540 (+),score=104.55,PaO|PF08417.8|1.6e+04,PaO|PF08417.8|3.9e-21,PaO|PF08417.8|2.4e+03,Rieske|PF00355.22|7.6e-20 R_Transcript_45278:331-1950(+)
MAYSLYTPTQTPTITKPFSHFPSLSPFHHSKPQISSSKRLSNFPYLRVSTPSKPISAEQEQPTILDDHDDEFISTETAQPNESSKFTWRDHWYPVSLIEDLDPSLPTPFQLLGRDLVLWFSKSSNEWVALDDKCPHRLAPLSEGRLDENGDLQCSYHGWSFDGCGSCTRIPQAKSDGPEAKAVKSPRACATKLPTMVSQGLLFVWPDENGWERASASQPPRLPEDFDKPEFATVSIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKVASSGPWGFAGANDDNPRISAEFIAPCYYLNKIEIDTKLPIVGDQKWVIWICSFNIPMAPGKTRSIVCSARNFFQFTVPGPNWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKFFLSKSAEGSEDINKQYTKVTFTPTQADRFVLAFRNWLRRHGNGQPEWFGTVSQQPLPSTVLSKRQMLDRYEQHTLKCASCRGAHEAFETWKKVLVGATVIFSATAGIPPSLQFRIVLGGLAILSAALAYALHELQKNFVFVDYVHAEID*

Click here to download the sequence:
Link to NCBI Protein BLAST