Transcript Information: R_Transcript_453134.p1


Annotated TAIR IDAT5G01530.1
Annotated Gene Namelight harvesting complex photosystem II
Annotated Gene Symbol(s)LHCB4.1
Annotation TypeOrtholog
Chromosome Positionchr5:209084-210243 | Forward length=290
E-Value5.5E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17836769662592
Replicate 20.27356743213418
Replicate 30.44768868266096
Condition 2: 8 Hour
Replicate 10.23927555323041
Replicate 20.36418374334178
Replicate 30.17737730247935
Condition 3: 24 Hour
Replicate 10
Replicate 20.21552370251378
Replicate 30.14259091001236


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_453134.p1 GENE.R_Transcript_453134~~R_Transcript_453134.p1 ORF type:complete len:307 (+),score=-13.96,Chloroa_b-bind|PF00504.17|5.8e-49 R_Transcript_453134:49-921(+)
ATGGCGTCGTCGGTGGCAGCGGCGGCGAGCACGTTCCTGGGGACGAGGCTGGCGGACCCGGCGCCGCAGAGCGGGAGGATCGTGGCGAGGTTCGGGTTCGGCGGCGGGAAGAAGGCGGCGGCGAAGAAGGCGGCGAGGCCGTCGGCGCCGACGACGGACAGGCCGCTGTGGTTCCCCGGCGCGGTGGCGCCGGACTACCTGGACGGGTCGCTCGTCGGCGACTACGGCTTCGACCCGTTCGGCCTCGGGAAGCCGGCGGAGTACCTGCAGTTCGAGCTGGACTCGCTGGACCAGAACCTGGCCAAGAACAACGCCGGCGAGATCATCGGCACCCGGTTCGAGACCGGCGAGGTGAAGTCCACCCCGTTCCAGCCGTACACCGAGGTGTTCGGCCTCCAGCGCTTCCGCGAGTGCGAGCTCATCCACGGCCGCTGGGCCATGCTCGCCACCCTCGGCGCCCTCTCCGTCGAGTGGCTCACCGGCGTCACCTGGCAAGACGCCGGCAAGGTGGAGCTGGTGGATGGGTCGTCGTACCTGGGGCAGCCGCTGCCGTTCTCGATCTCGACGCTGATCTGGATCGAGGTGCTCGTCATCGGCTACATTGAGTTCCAGCGCAACGCGGAGCTGGACCCGGAGAAGAGGCTGTACCCGGGGGGGTCCTACTTCGACCCGCTCGGGTTGGCGTCGGACCCGGAGAAGAAGGAGCGGCTGCAGCTGGCGGAGATCAAGCACGCCCGCCTCGCCATGGTCGCCTTCCTCGGCTTCGCCGTGCAGGCCGCCGCCACCGGCAAGGGGCCCCTCAACAACTGGGCCACCCACCTCAGCGACCCGCTCCACACCACCATCTTCGACACCTTCTCCTCATCCTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_453134.p1 GENE.R_Transcript_453134~~R_Transcript_453134.p1 ORF type:complete len:307 (+),score=-13.96,Chloroa_b-bind|PF00504.17|5.8e-49 R_Transcript_453134:49-921(+)
MASSVAAAASTFLGTRLADPAPQSGRIVARFGFGGGKKAAAKKAARPSAPTTDRPLWFPGAVAPDYLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNNAGEIIGTRFETGEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKERLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIFDTFSSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST