Transcript Information: R_Transcript_453198.p1


Annotated TAIR IDAT3G22320.1
Annotated Gene NameEukaryotic rpb5 RNA polymerase subunit family protein
Annotated Gene Symbol(s)ATRPABC24.3, RPB5A, NRPB5, NRPD5
Annotation TypeHomolog
Chromosome Positionchr3:7891045-7892094 | Reverse length=205
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10254472446471
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.25124586338411
Replicate 30
Condition 3: 24 Hour
Replicate 10.51590578039784
Replicate 20.24781189764694
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_453198.p1 GENE.R_Transcript_453198~~R_Transcript_453198.p1 ORF type:internal len:178 (+),score=1.04,RNA_pol_Rpb5_C|PF01191.15|3.3e+03,RNA_pol_Rpb5_C|PF01191.15|8.2e-11 R_Transcript_453198:3-533(+)
GAGGATAAGGTAAAGATAATAATTAATAATATACTTATTATGTTATCAAAAAGAGCATATCCAGATAATGAGGGAAATATGTTGCCCTTGATTGATATAGATAATCATAAATTAAAAGATTTAGGTGACCAAACGTTTAGTATCAAATCAAATAATGGAGAATCATATGCAATTAAAATTTTGTTCCAAAAGGTACCAACACTTTCTAAAAATCCAGCTGTAATGGAATTTATAAATTCGCATACTAACAGCAAAAAAATATTGGTCCTTAAAGAATACAATAAAAAAATGGACGAATCTTTGGCAAAATATAATGGTTCTGTATTTGGAGAATTATTCTTTTTGATGAATATTTTGGATTATTATTGCCAACCAATTTTTATTTTATTGCATCCAAAGGAAATAGAAAGATTAAAGGATTCAGAAAAAGGATTTAATGAATACACGTGTCTGAAAATTTTAAAAACAGATCCTATATCAAAATATTTTAATTTAAAAAAGGGAGATATAATAAAAATAATTAGGCCCAGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_453198.p1 GENE.R_Transcript_453198~~R_Transcript_453198.p1 ORF type:internal len:178 (+),score=1.04,RNA_pol_Rpb5_C|PF01191.15|3.3e+03,RNA_pol_Rpb5_C|PF01191.15|8.2e-11 R_Transcript_453198:3-533(+)
EDKVKIIINNILIMLSKRAYPDNEGNMLPLIDIDNHKLKDLGDQTFSIKSNNGESYAIKILFQKVPTLSKNPAVMEFINSHTNSKKILVLKEYNKKMDESLAKYNGSVFGELFFLMNILDYYCQPIFILLHPKEIERLKDSEKGFNEYTCLKILKTDPISKYFNLKKGDIIKIIRPS

Click here to download the sequence:
Link to NCBI Protein BLAST