Transcript Information: R_Transcript_45325.p1


Annotated TAIR IDAT4G36680.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17292479-17293717 | Reverse length=412
E-Value2.7E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.102203640333
Replicate 212.392938294498
Replicate 318.269519985224
Condition 2: 8 Hour
Replicate 112.601262204558
Replicate 212.162138172157
Replicate 318.682877272691
Condition 3: 24 Hour
Replicate 131.245015690388
Replicate 229.586322901994
Replicate 331.230017663012


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45325.p1 GENE.R_Transcript_45325~~R_Transcript_45325.p1 ORF type:complete len:410 (+),score=74.07,PPR_2|PF13041.2|2.9e-05,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|2.4e-07,PPR_2|PF13041.2|2.1e-10,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|1.6e-14,PPR_2|PF13041.2|22,PPR|PF01535.16|8.3e+03,PPR|PF01535.16|0.0005,PPR|PF01535.16|0.026,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.42,PPR|PF01535.16|4.5e+02,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|17,PPR_1|PF12854.3|7.2e-11,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|7.8e+02,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|5.8e-06,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|1e-06,PPR_3|PF13812.2|4.4e+02,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|90,TPR_14|PF13428.2|16,TPR_14|PF13428.2|99,TPR_14|PF13428.2|6.1e+03,TPR_14|PF13428.2|20,TPR_14|PF13428.2|2.6e+02,ATP13|PF12921.3|5.6e+02,ATP13|PF12921.3|20,ATP13|PF12921.3|2.9e+02,ATP13|PF12921.3|3.8,ATP13|PF12921.3|2.2e+02,ATP13|PF12921.3|16 R_Transcript_45325:158-1387(+)
ATGACGTCTTCCATCTCCATTCGCCTGGTTCGTCGTCTCTGCACCACCTCATCATCATCAACAACAATAAAACCAGACATTTCAATCTCAAGAGCCAAATCCAAGCTCCGTTCTGAATTCGACCCAGACAAGGCCTTACAAATCTACTCCTCTGTTTCCAACCGTTACACCTCCCCTGTCTCTGCTCGCTATGCTCAAGAACTCACCGTTCAACGTCTCGCCAAAGCGCATCGTTTTGATGACATCGTATCATTCCTTGAGTCCCACAAAAAGGACCCTAAGATCACTCAAGAGCCCTTCCTTTGTACCATTATCCGATCTTATGGCCGTGCAGGTATGTTCGATCATGCCCTTCAAACTTACAACCAAATGGATGAGCTGGGTACCCCCAGATCAACTGTTTCTTTCAATGCTTTGCTTGCTGCATGTAATCATTCTAGGCTTTTCGATAGAGTCCCCCAAATGTTCGATGAAATGTCCCAAAGACACGGGTTTGTCCCCGATAAGATCTCTTACGGGACCTTGGTTAAGGCTCACTGCGAGATGGGCTTTCCCGATAAAGCTTTGAAGGTTTTGGACGAGATGGAAGAGAAGGGTGTTGAGGTTACTGCTGTGGTTTACACTACCATTTTGGATGCTATGTATAAGACGGGGGACAACGATGCGGCGGAGCGGATTTGGGATGATATGGTTAAAAAGGGCTGTTCTCCTGATGTGGCTATGTTTAATGTTAAGATTTCTCATGTGGCTGGTGGTGAGCCTGAGGATGTCAAGGGTTTGATTGAAGATATGACTGCCATGGGATTGAAACCTGATACGATTAGTTATAATTATTTGTTGACCAGTTATTGTAGGAATGGGAGAATGGAGGAAGCTATGAAGCTTTACGAGGAGTTGGAAGCGAGTGGGTTTAGGCCGAAGGCTGCAACTTTTAGGACTTTGATACATTATCTATGTAAGAATGAGGATTTTGTTAAAGGTTATGATGTGTTCAAGAGGAGTGTTTTTCACCACAAGATCCCTGATGTTGCTACCTTGAAGGTTTTGGTGGAAGGATTAGTGGCAAAGAAACAGTTTAAGGATGCCAAGGGGTTGATTCGAACAGTTAAGAAGAGGTTCCCATCTAGTATGCTGAATGCTTGGAACAAAGTTGAGTCAGAACTTGGTTTGGTTTCGAAAGAAACTTCTCCTGATGATAACTCAGAAGAGTCTCAGGAGGCAGTAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45325.p1 GENE.R_Transcript_45325~~R_Transcript_45325.p1 ORF type:complete len:410 (+),score=74.07,PPR_2|PF13041.2|2.9e-05,PPR_2|PF13041.2|3.5e-08,PPR_2|PF13041.2|2.4e-07,PPR_2|PF13041.2|2.1e-10,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|1.6e-14,PPR_2|PF13041.2|22,PPR|PF01535.16|8.3e+03,PPR|PF01535.16|0.0005,PPR|PF01535.16|0.026,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00012,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|1.4e-08,PPR|PF01535.16|0.42,PPR|PF01535.16|4.5e+02,PPR_1|PF12854.3|0.23,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|1.7e-08,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|17,PPR_1|PF12854.3|7.2e-11,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|7.8e+02,PPR_3|PF13812.2|3.3e+03,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|0.049,PPR_3|PF13812.2|5.8e-06,PPR_3|PF13812.2|1.1e-05,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|1e-06,PPR_3|PF13812.2|4.4e+02,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|90,TPR_14|PF13428.2|16,TPR_14|PF13428.2|99,TPR_14|PF13428.2|6.1e+03,TPR_14|PF13428.2|20,TPR_14|PF13428.2|2.6e+02,ATP13|PF12921.3|5.6e+02,ATP13|PF12921.3|20,ATP13|PF12921.3|2.9e+02,ATP13|PF12921.3|3.8,ATP13|PF12921.3|2.2e+02,ATP13|PF12921.3|16 R_Transcript_45325:158-1387(+)
MTSSISIRLVRRLCTTSSSSTTIKPDISISRAKSKLRSEFDPDKALQIYSSVSNRYTSPVSARYAQELTVQRLAKAHRFDDIVSFLESHKKDPKITQEPFLCTIIRSYGRAGMFDHALQTYNQMDELGTPRSTVSFNALLAACNHSRLFDRVPQMFDEMSQRHGFVPDKISYGTLVKAHCEMGFPDKALKVLDEMEEKGVEVTAVVYTTILDAMYKTGDNDAAERIWDDMVKKGCSPDVAMFNVKISHVAGGEPEDVKGLIEDMTAMGLKPDTISYNYLLTSYCRNGRMEEAMKLYEELEASGFRPKAATFRTLIHYLCKNEDFVKGYDVFKRSVFHHKIPDVATLKVLVEGLVAKKQFKDAKGLIRTVKKRFPSSMLNAWNKVESELGLVSKETSPDDNSEESQEAVA*

Click here to download the sequence:
Link to NCBI Protein BLAST