Transcript Information: R_Transcript_453277.p1


Annotated TAIR IDAT5G06860.1
Annotated Gene Namepolygalacturonase inhibiting protein 1
Annotated Gene Symbol(s)PGIP1, ATPGIP1
Annotation TypeHomolog
Chromosome Positionchr5:2132373-2133434 | Forward length=330
E-Value8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26842589639292
Replicate 20.46315368565363
Replicate 30.50529568226807
Condition 2: 8 Hour
Replicate 10.1800431246121
Replicate 20.49325474649674
Replicate 30.1334677251499
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_453277.p1 GENE.R_Transcript_453277~~R_Transcript_453277.p1 ORF type:complete len:136 (+),score=18.23,LRR_8|PF13855.2|2.5e+02,LRR_8|PF13855.2|5.5e-06 R_Transcript_453277:158-565(+)
ATGGTTCTCTTGTTGAATGCCAACAAGTTGAGTGGGCAGGTCTCTGAGCTTCTAGGCCGCGTAAAGGCATGGAAGTTGGATCTTTCTTGCAACAAACTTGTTGGGGATGTTTCATTTTTGTTGGCTAGGGACAAAAGAGAGTTGAAGTCACTTTCTCTTCAAAACAATTTCTTCATGTTTGATTTCTCAAATTTGGATCCTCCTCCTAACCTCAAGTACCTCAACATTAGTCACAACTTAATATACGGTTCCCATTCACAAAGATTGGGTCAGTTACATTCATTGCGGTCTATTGATGTGAGGTACAATAGGTTATGTGGCTCGATCCCTATGAGTCTATGGTTGAACTTGAAGCCGCTTAGCCCTGTCTTCTTTGCCAACGATAAGTGCCTTTGCAATCCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_453277.p1 GENE.R_Transcript_453277~~R_Transcript_453277.p1 ORF type:complete len:136 (+),score=18.23,LRR_8|PF13855.2|2.5e+02,LRR_8|PF13855.2|5.5e-06 R_Transcript_453277:158-565(+)
MVLLLNANKLSGQVSELLGRVKAWKLDLSCNKLVGDVSFLLARDKRELKSLSLQNNFFMFDFSNLDPPPNLKYLNISHNLIYGSHSQRLGQLHSLRSIDVRYNRLCGSIPMSLWLNLKPLSPVFFANDKCLCNPP*

Click here to download the sequence:
Link to NCBI Protein BLAST