Transcript Information: R_Transcript_45337.p1


Annotated TAIR IDAT5G17190.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5652310-5652702 | Forward length=130
E-Value5.6E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 167.69188534966
Replicate 294.114070207728
Replicate 381.267119310973
Condition 2: 8 Hour
Replicate 160.045739167114
Replicate 269.554702812532
Replicate 374.065868461077
Condition 3: 24 Hour
Replicate 172.56512937802
Replicate 272.926433919597
Replicate 367.312941047142


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45337.p1 GENE.R_Transcript_45337~~R_Transcript_45337.p1 ORF type:5prime_partial len:199 (+),score=10.72 R_Transcript_45337:1-597(+)
AGAAACTTAACACCTACGCACAACTTCCAAACTCCCCTCGCTAAGATGCCGCGTGGAAAAGGAAAACCAGAACGTGTGTCCTGCTCTAATTATATTCCCGAAGCGTTAAAATCTTTCCTCTCCTTCCACCTCTTTCTCTCTCATTTCCCAGACCCCAGATCTAACCTCCTCCTCCTTTCTTCTCCTCCCAAATTCTCATCAATGGCGTTAGAATGGGTAGTACTTGGCTATGCAGCAGGTGCAGAGGCAATAATGGTCCTTCTATTAACCCTCCCAGGTCTCGATGGTCTTCGCAAGGGTTTGATCGTGGTCACTCGTAACCTCCTCAAACCCTTCCTATCAATAGTCCCCTTTTGCTTGTTCCTTCTTATGGATATTTACTGGAAGTACGAGACTCGTCCGAGTTGTGAGTCCGATTCTTGTACCCCTTCCGAGTTCCTTCGCCATCAGAAATCCATCATGAAGAGCCAGCGTAATGCTCTTCTTATCGCTGCTGCTCTCGTCTTCTACTGGATCCTTTACTCTGTCACTGGCTTGGTCGTCAAGATTGAGCAGCTCAATCAGCGCATTGACAGGTTGAAGAGCCGTGCCGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45337.p1 GENE.R_Transcript_45337~~R_Transcript_45337.p1 ORF type:5prime_partial len:199 (+),score=10.72 R_Transcript_45337:1-597(+)
RNLTPTHNFQTPLAKMPRGKGKPERVSCSNYIPEALKSFLSFHLFLSHFPDPRSNLLLLSSPPKFSSMALEWVVLGYAAGAEAIMVLLLTLPGLDGLRKGLIVVTRNLLKPFLSIVPFCLFLLMDIYWKYETRPSCESDSCTPSEFLRHQKSIMKSQRNALLIAAALVFYWILYSVTGLVVKIEQLNQRIDRLKSRAD*

Click here to download the sequence:
Link to NCBI Protein BLAST