Transcript Information: R_Transcript_45342.p1


Annotated TAIR IDAT5G41950.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16785825-16789360 | Forward length=565
E-Value3.2E-225
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.597037824638
Replicate 232.697151327905
Replicate 335.360886192119
Condition 2: 8 Hour
Replicate 131.522579534026
Replicate 237.297082527337
Replicate 346.806483308493
Condition 3: 24 Hour
Replicate 145.603566590177
Replicate 238.800125349249
Replicate 345.985430041209


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45342.p1 GENE.R_Transcript_45342~~R_Transcript_45342.p1 ORF type:complete len:515 (+),score=90.33,TOM20_plant|PF06552.8|3.7e-06,TOM20_plant|PF06552.8|0.00024,TPR_11|PF13414.2|23,TPR_11|PF13414.2|0.03,TPR_11|PF13414.2|0.012,TPR_11|PF13414.2|3,TPR_17|PF13431.2|0.47,TPR_17|PF13431.2|0.99,TPR_17|PF13431.2|1.6,TPR_17|PF13431.2|1.7e+03 R_Transcript_45342:196-1740(+)
ATGTCCGCGGTGCCGGAGTTATCCGAATCACAAAACGCGTCGTTACAATCAGTTCCGGAATCGGAACCCCAACAACTAGTAGAAGAAGCAACGGCGACAGAAAATGCAGATCCCCATCAATCAAACGACGCCGTGGAACAGCAACTGGAGCCTGTTGCTTCTCGAAAGGATCCGATTCACGACGAATCCGGGTCCCTCCCCACCGTATCAACCGAGGAGTCCAATCCCAATCAATCTCAGTCTCAAGGTGAGCTGAAAAAGGATGAAGGGAGCCGAAGCTTGACGATGAGAGAATTGTTGAATGGTTTGAAAGGAGATCAGACTCAATCCCCTGATTCTCCCTCTCATCAAAGTGAAGCAGTGTCTCAGCAGCAGTCACACTCACAGCAGAACAATGCTGCCATGGAACTTATTAACAGTGTCACGGGTGTTGATGATGAAGGTCGATCTCGCCAAAGGATTCTCACTTTTGCTGCTAGGAGGTATGCTAGTGCAATTGAGAGAAATCCTGGAGATTATGATGCCCTTTACAACTGGGCTCTCGTCCTTCAGGAGAGCGCAGATAACGTTGACCCTGACTCTGCTTCACCTTCCAAAGATGCGCTGCTTGAGGAGGCTTGCAAGAAGTACGAGGAAGCAACTCGTCTTTGTCCTACCCTTCATGATGCATATTATAATTGGGCCATAGCTATCTCTGATCGAGCAAGAATGCGGGGTCGTACAAAGGAGGCTGAAGAATTGTGGGAGCAAGCCACGAAACAATATGAAAAAGCTGTGCAGTTGAATTGGAACAGCCCCCAGGCACTGAACAACTGGGGACTCGCACTGCAGGAACTCAGTGCTATAGTTCCTGCAAAGGAAAAGCATAACATTGTTAAGACGGCAATTAGTAAGTTCCGTGCTGCAATTCAATTGCAATTTGACTTTCACAGAGCTATTTACAACCTTGGCACTGTTCTGTATGGCTTAGCCGAGGACTTGCTAAGAATTGGGGGAGCAGTCAGTCCAAAAGATGTATCACCGAATGAGTTGTACAGTCAGTGTGCTATCTACATTGCGGCTGCTCATGCGTTGAAGCCAAATTACTCAGTCTACCGCAGTGCATTGAGGCTTGTTCGATCAATGCTGCCTTTGCCCTATCTTAAAGTGGGATATCTAACAGCACCACCTGTTGGCAATCCAGTTGCCCCGCATAGTGATTGGAAGCGGACGCAATTTGTCCTTAACCATGAGGGACTTTATCAGCTTGTTCTATTAGATCAAAAGCCATCAAGACAGAGCCTTTCGGGCAAGCCAACAGACACTGCAAATTCTAAAAACTCAGCCATCAAAGTTGACATACCTGATATTGTTTCAGTGTCAGCTTGTTCTGATCTTACATTGCCAGCTGGAGCTGGCCTCTGTATTGACACAACCCAGGGACCGGTTTACTTGGTAGTGGACTCATGGGAGTCTTTGGACGGATGGCTGGATGCAATGCGTTTAGTTTACACAATTTTTGCACGAGGTAAAAGTGATGTTCTTGCCGGTATAATCGCTGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45342.p1 GENE.R_Transcript_45342~~R_Transcript_45342.p1 ORF type:complete len:515 (+),score=90.33,TOM20_plant|PF06552.8|3.7e-06,TOM20_plant|PF06552.8|0.00024,TPR_11|PF13414.2|23,TPR_11|PF13414.2|0.03,TPR_11|PF13414.2|0.012,TPR_11|PF13414.2|3,TPR_17|PF13431.2|0.47,TPR_17|PF13431.2|0.99,TPR_17|PF13431.2|1.6,TPR_17|PF13431.2|1.7e+03 R_Transcript_45342:196-1740(+)
MSAVPELSESQNASLQSVPESEPQQLVEEATATENADPHQSNDAVEQQLEPVASRKDPIHDESGSLPTVSTEESNPNQSQSQGELKKDEGSRSLTMRELLNGLKGDQTQSPDSPSHQSEAVSQQQSHSQQNNAAMELINSVTGVDDEGRSRQRILTFAARRYASAIERNPGDYDALYNWALVLQESADNVDPDSASPSKDALLEEACKKYEEATRLCPTLHDAYYNWAIAISDRARMRGRTKEAEELWEQATKQYEKAVQLNWNSPQALNNWGLALQELSAIVPAKEKHNIVKTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDLLRIGGAVSPKDVSPNELYSQCAIYIAAAHALKPNYSVYRSALRLVRSMLPLPYLKVGYLTAPPVGNPVAPHSDWKRTQFVLNHEGLYQLVLLDQKPSRQSLSGKPTDTANSKNSAIKVDIPDIVSVSACSDLTLPAGAGLCIDTTQGPVYLVVDSWESLDGWLDAMRLVYTIFARGKSDVLAGIIAG*

Click here to download the sequence:
Link to NCBI Protein BLAST