Transcript Information: R_Transcript_45345.p1


Annotated TAIR IDAT4G26700.1
Annotated Gene Namefimbrin 1
Annotated Gene Symbol(s)ATFIM1, FIM1
Annotation TypeOrtholog
Chromosome Positionchr4:13463760-13467426 | Forward length=687
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.438339105419
Replicate 214.826334943088
Replicate 317.715883316323
Condition 2: 8 Hour
Replicate 116.789284591021
Replicate 222.033968363975
Replicate 326.643592197176
Condition 3: 24 Hour
Replicate 114.633923905379
Replicate 213.349235644297
Replicate 314.591803124598


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45345.p1 GENE.R_Transcript_45345~~R_Transcript_45345.p1 ORF type:complete len:684 (+),score=138.61,CH|PF00307.27|6.9e-15,CH|PF00307.27|4.4e-20,CH|PF00307.27|4e-15,CH|PF00307.27|2.9e-14,CAMSAP_CH|PF11971.4|0.84,CAMSAP_CH|PF11971.4|20,CAMSAP_CH|PF11971.4|0.037,CAMSAP_CH|PF11971.4|2.9e+02,CH_2|PF06294.7|1.4e+04,CH_2|PF06294.7|31,CH_2|PF06294.7|0.011,CH_2|PF06294.7|3.3 R_Transcript_45345:729-2780(+)
ATGGCTGGTTATGCTGGTGTTCTGGTTTCTGATCCATTGCTTCAGAGCCATTTCACTCAGGTTGAACTTAGAAGCCTCAAATCCAAATATACAGCTGTGAAGAATCAAAATGGTAAGGTTGCCGTTGCGGATTTGCCAGCAATTATGGCCAAGTTAAAGGCATTTAGCATGTTTAAAGAGGAAGATATTAGGACGTTTTTGAGTGGCTCTGTCTGCGATATGGACCAAGAGGTCGAATTCGAAGCTTTTCTAAAGGTTCATTTGAGCTTACAAGCTCGCGCAGCAGCGCATGCTGGTGGAGCAAAGAACTCTTCTGCCTTTCTCAAGGTGTCGACAACTACCCTTCTTCATACAATCAGCCAATCAGAGAAGGGATGCTATGTTCATCACATCAACACTTACCTTGGCGATGACCCTTTTCTGAAACAGTTTCTTCCTGTCGACCCAAATGGTGATGATATCTTCGACCTCGCTAAAGATGGAGTTTTGCTCTGTAAGCTTATAAATGTGGCTGTTCCGGGAACAATAGATGAACGAGCTATAAACACCAAAGTAGTACTCAATCCATGGGAGAGGAATGAAAACCACACCTTGTGCCTTAACTCTGCAAAAGCCATTGGATGCACTGTGGTTAACATAGGTCCACATGACTTGGTGGAAGGCAGACCTCATTTGGTCCTTGGATTAATTTCCCAAATTATAAAGATCCAACTCCTTGCTGATCTCAACCTCAGGAAAACACCACAGCTTGTTGAATTGGCGGATGATGCCAATGACATTGAGGAGCTCATGGGTTTGTCCCCTGAGAAGGTCTTACTAAAATGGATGAATTACCATCTCCAGAAAGCTGGATACAAGAAAGTCCTTACAAATTTTTCATCAGATTTGAAGGATGGGGAGGCTTATGCTTACCTGCTTAATGTTCTTGCACCAGAACATTGTGACCCAGCCACATTAGACACAAAGGATCCGACTGACAGGGCAAATTTGGTACTTGACCATGCAGAAAGAATGGGCTGTAAAAGATACTTAGATCCTATGGACATTGTTGAAGGCTCATCAAATCTGAATCTTGCATTTATCGCTCAAATATTTAAGCAGAGGAATGGTTTGTCAATGGACGGCAAGAAGGTCTCTTTTGCAGAGATGATGCCAGATGATGTGCTTACATCTAGAGAGGAAAGGTGCTTCAGATTTTGGATGAATAGTCTTGGTACTGCTACATATGTCAACAATGTGTTTGAGGATGTTAGAAATGGATGGGTGCTTTTGGAAGTTCTAGATAAGGTCTCACCAGGTTCAGTTAATTGGAAGCATGCTACAAGACCCCCAATCAAAATGCCCTTCAGAAAAGTCGAGAATTGCAATCAAGTCATAAAGATAGGGAAACAGATGAATTTTTCACTTGTAAATGTGGCTGGCAATGACATCGTACAAGGAAACAAGAAGTTAATAGTAGCATTTCTATGGCAGCTGATGAGATATAACATGCTCCAACTTTTGAAGAACTTGAGGTCTTTCTCCCATGGAAAGGAGATCTCTGATGCAGACATCTTGAATTGGGCAAATAGAAAGGTGAAAAGCTCAGGGAGAAGGTCTCGCATTGAGAGCTTCAAGGACAAGAGCTTGTCTACTGGTCTGTTCTTCCTTGAGCTTTTAAGTGCGGTGGAGCCTAGGGTTGTCAATTGGAACCTTGTTACCAAGGGTGAAAAAGATGACGAGAAGAGGTTGAATGCTACTTACATAATAAGTGTTGCAAGGAAGCTTGGTTGCTCCGTTTTCTTACTTCCCGACGATATCATGGAGGTAAACCAGAAGATGATCCTTACCTTGACCGCTAGTATCATGTACTGGTGCTTACGACAGGATGATTCAGAGTCCTCTTCCACTTCAGAGGCTGCCACCACCACAGACATATCTTCGTCTGCTCCCTCTGTCTATAGCGAGGACGAGAGCTCGATCTGTGGGGAAGTCTCTTCATTAAACATTGATGACACGGCCTCCGATTCGACTGCCTCCTCAGCGGTCGAGAACATCGAAGATGAACAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45345.p1 GENE.R_Transcript_45345~~R_Transcript_45345.p1 ORF type:complete len:684 (+),score=138.61,CH|PF00307.27|6.9e-15,CH|PF00307.27|4.4e-20,CH|PF00307.27|4e-15,CH|PF00307.27|2.9e-14,CAMSAP_CH|PF11971.4|0.84,CAMSAP_CH|PF11971.4|20,CAMSAP_CH|PF11971.4|0.037,CAMSAP_CH|PF11971.4|2.9e+02,CH_2|PF06294.7|1.4e+04,CH_2|PF06294.7|31,CH_2|PF06294.7|0.011,CH_2|PF06294.7|3.3 R_Transcript_45345:729-2780(+)
MAGYAGVLVSDPLLQSHFTQVELRSLKSKYTAVKNQNGKVAVADLPAIMAKLKAFSMFKEEDIRTFLSGSVCDMDQEVEFEAFLKVHLSLQARAAAHAGGAKNSSAFLKVSTTTLLHTISQSEKGCYVHHINTYLGDDPFLKQFLPVDPNGDDIFDLAKDGVLLCKLINVAVPGTIDERAINTKVVLNPWERNENHTLCLNSAKAIGCTVVNIGPHDLVEGRPHLVLGLISQIIKIQLLADLNLRKTPQLVELADDANDIEELMGLSPEKVLLKWMNYHLQKAGYKKVLTNFSSDLKDGEAYAYLLNVLAPEHCDPATLDTKDPTDRANLVLDHAERMGCKRYLDPMDIVEGSSNLNLAFIAQIFKQRNGLSMDGKKVSFAEMMPDDVLTSREERCFRFWMNSLGTATYVNNVFEDVRNGWVLLEVLDKVSPGSVNWKHATRPPIKMPFRKVENCNQVIKIGKQMNFSLVNVAGNDIVQGNKKLIVAFLWQLMRYNMLQLLKNLRSFSHGKEISDADILNWANRKVKSSGRRSRIESFKDKSLSTGLFFLELLSAVEPRVVNWNLVTKGEKDDEKRLNATYIISVARKLGCSVFLLPDDIMEVNQKMILTLTASIMYWCLRQDDSESSSTSEAATTTDISSSAPSVYSEDESSICGEVSSLNIDDTASDSTASSAVENIEDEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST