Transcript Information: R_Transcript_453921.p2


Annotated TAIR IDAT5G22800.1
Annotated Gene NameAlanyl-tRNA synthetase, class IIc
Annotated Gene Symbol(s)EMB86, EMB1030, EMB263
Annotation TypeHomolog
Chromosome Positionchr5:7616221-7619961 | Reverse length=978
E-Value1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18817485520329
Replicate 20.14430447021511
Replicate 30.078717311326984
Condition 2: 8 Hour
Replicate 10.12621579869714
Replicate 20.07684151835459
Replicate 30.062376668798581
Condition 3: 24 Hour
Replicate 10.47335685005576
Replicate 20.11368690149782
Replicate 30.11282322003555


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_453921.p2 GENE.R_Transcript_453921~~R_Transcript_453921.p2 ORF type:5prime_partial len:582 (+),score=-47.83,tRNA-synt_2c|PF01411.15|1.4e-13,tRNA_SAD|PF07973.10|4.5e-13 R_Transcript_453921:2-1747(+)
TCGTTTCGTCCGATCATCGACCTTGAGTACCAGCGTTGGCTTCACACCGACTCTGCGCAGGCGGACAAACTCGTGAAGATGATGGCGAAGAAGGGCAAAGCGCAGCTCTCTCTCGACGACTGGATCGTCGCCGTCAGCTCGTGGGGCATCCCGCCGAATCAGATCGCGAAGGTGACCAAGCAACCGATCCCGCTCAACCTCTACTACGAGATCGCCTCGCGGCAAGAGAAGATGGTGCGCGCGACTGCGGCGCAACTCTACGCGACAGCGCACTTGCCGGAGACGAAGTCGCTCTACTACGCGAATCACAAGCAGTACGACTTCACCGGGAAGATTCTTGAGGTGATGCTCAACGTCACCGATCATTCGAAGCCGAACATCGTTGTCCTCGACCAGTCCTCCTTCTACCCGACCTCGGGTGGTCAGGAGCACGACGACGGTAAGATGTGGATCGACGGCGCGGAGTATGCCGTTGTCGACGTGATGAAGGTCGGCCCGTGCGTCTTGCACGTCCTCGCTCCACCGCTGCCGTCGGAGGCGAACTACGACGCGTATAAGGGCAAGGAGGTGCGCGGTCTCGTCAACGCCGAGCGACGCACCCAGCTCCGCAACAATCACTCCGCGACGCACATCGTCTACGCCTCGTGCCGCAAGGTCCTTGGACCGCACGTCTGGCAGCACGGTGCAAAGAAATCCGTGCACCAGGCGCACTTGGACATCACGCACTTCCAGTCGCTCTCGCATGCCGACATGCTCGCGATCGAGAATGAGGCGAATCGTATCGTCATGCGATGCAAGGACGTGTCGAAGGGTTTCATGCCGAAGGACGAGGCCGAGGCGAAGCACGGCTTCCATCTTTACCAGGGCGGTGTCGTCCCGGGCAATGAGCTGCGCGTCGTCTCGATCGCCGATACCGACACGGAGGCGTGCTGTGGTACGCACGTCGACAACACGGCTGAGGTTGGCATGATCAAGCTGATCAAGAGTGCGCGTATCTCTGATGGTATCGTGCGTCTCTACTTCGTCGCTGGCGAGAACGCGCTCGCGATCGCGAACAACGACAGCAACATTCTCGATGGTCTCACCTCGAGTTGGGGTGTCGCGGCGGACGACATTCTGCCGACGGCGACGCGCTTCTTCGACGGGTATAAGAAGTACTCGAGTCTTGTCCAGAAGCAGAATCAGCAGATCCTCGATCTCCAAATGAAGGTCTTCCTGCTCGAGCCGGAGAACAAACTTGCCGTCTTCGAATCGTCCGAGCCGAATGCGACTCTGTTCATCGGCGCCATGCCGGCATTTGCGCAGAAGCTGAAGGAGCAGGGCAAGGGCGTCGTGTTCGTCGGTTCGTCGTTCATCTATGGCCTTCTCGGCAATCCGTCTGCGGTGCCGAAGATCGGTGAGTTGGAGTCGTTCCTCGCGGCGGTCGCGATCGAGTCGGCGGAGGAGGACCGTCAACGTGCACTCAAGAAGCTGAACCCACAGCAGCAGGAGGAGCAGAAGACGAAGGAGGCGGCGGATGCGGCCACCCCGGCGCCGGTGACAGCGGCGGCGGGCAAGCCGAAGCAACTGGTTCGCTCGAAAGACACGGTCGTGATCAAGACGAAGAAGGTGGTGGACAAGAAGCCGACCGTCGTCACTGAGAAGATCACTGCGATCAACGAGTTCGTTGTCTTCGCGTACGAGGGACACCAGGAAAAGGTTGTCGACTGGTTCGCGAAGCAGGGATTCTCGACCCAGCAGCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_453921.p2 GENE.R_Transcript_453921~~R_Transcript_453921.p2 ORF type:5prime_partial len:582 (+),score=-47.83,tRNA-synt_2c|PF01411.15|1.4e-13,tRNA_SAD|PF07973.10|4.5e-13 R_Transcript_453921:2-1747(+)
SFRPIIDLEYQRWLHTDSAQADKLVKMMAKKGKAQLSLDDWIVAVSSWGIPPNQIAKVTKQPIPLNLYYEIASRQEKMVRATAAQLYATAHLPETKSLYYANHKQYDFTGKILEVMLNVTDHSKPNIVVLDQSSFYPTSGGQEHDDGKMWIDGAEYAVVDVMKVGPCVLHVLAPPLPSEANYDAYKGKEVRGLVNAERRTQLRNNHSATHIVYASCRKVLGPHVWQHGAKKSVHQAHLDITHFQSLSHADMLAIENEANRIVMRCKDVSKGFMPKDEAEAKHGFHLYQGGVVPGNELRVVSIADTDTEACCGTHVDNTAEVGMIKLIKSARISDGIVRLYFVAGENALAIANNDSNILDGLTSSWGVAADDILPTATRFFDGYKKYSSLVQKQNQQILDLQMKVFLLEPENKLAVFESSEPNATLFIGAMPAFAQKLKEQGKGVVFVGSSFIYGLLGNPSAVPKIGELESFLAAVAIESAEEDRQRALKKLNPQQQEEQKTKEAADAATPAPVTAAAGKPKQLVRSKDTVVIKTKKVVDKKPTVVTEKITAINEFVVFAYEGHQEKVVDWFAKQGFSTQQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST