Transcript Information: R_Transcript_454339.p1


Annotated TAIR IDAT5G42790.1
Annotated Gene Nameproteasome alpha subunit F1
Annotated Gene Symbol(s)PAF1, ATPSM30, ARS5
Annotation TypeHomolog
Chromosome Positionchr5:17159270-17160975 | Reverse length=278
E-Value2E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44884330216522
Replicate 20.17210082308441
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.18817874776807
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_454339.p1 GENE.R_Transcript_454339~~R_Transcript_454339.p1 ORF type:internal len:122 (+),score=24.58,Proteasome|PF00227.22|1e-23,Proteasome_A_N|PF10584.5|4.8e-13 R_Transcript_454339:2-364(+)
GAAGACAGAGAAATGTTTCGTACATTGTATGATAACGATACCACCACCTGGTCTCCACAAGGAAGAATCCATCAGTTGGAATATGCAATGGAAGCTGTGAAGCAAGGAGCAGCTTGTGTTGGATTGAAATCTGAAACATTTGCAGTTCTTGCAACCATCAAAAGAACTCCATCAAAATACTGTTCATATCAAGAAAAGATTTTTAAGATTGACGATCATATGGGCATTGCAATCAGTGGATTGACTGCTGATGGAAGATATCTTTGTAAATACATGAGAAACGAATGCATGAACAACAAATGGGTCTTTGAATCCCCAATGCCAACTGAAAGATTGGTGAAACAAATCTCTGATAACTCTCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_454339.p1 GENE.R_Transcript_454339~~R_Transcript_454339.p1 ORF type:internal len:122 (+),score=24.58,Proteasome|PF00227.22|1e-23,Proteasome_A_N|PF10584.5|4.8e-13 R_Transcript_454339:2-364(+)
EDREMFRTLYDNDTTTWSPQGRIHQLEYAMEAVKQGAACVGLKSETFAVLATIKRTPSKYCSYQEKIFKIDDHMGIAISGLTADGRYLCKYMRNECMNNKWVFESPMPTERLVKQISDNSQ

Click here to download the sequence:
Link to NCBI Protein BLAST