Transcript Information: R_Transcript_45439.p1


Annotated TAIR IDAT5G24460.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8354815-8355717 | Forward length=300
E-Value3.5E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.024945351794
Replicate 214.380102857465
Replicate 314.657365857345
Condition 2: 8 Hour
Replicate 19.5266548508575
Replicate 210.784991241729
Replicate 310.389024728067
Condition 3: 24 Hour
Replicate 113.582754115426
Replicate 212.623267146375
Replicate 313.442288087451


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45439.p1 GENE.R_Transcript_45439~~R_Transcript_45439.p1 ORF type:complete len:311 (+),score=59.24 R_Transcript_45439:397-1329(+)
ATGATTAACATGCCCCATCAACCACCACCTCCTCCACATCATCAACCCCCTCATCAAAACAATTCAACCCTTCATAACCAATCTTCCCAATTTTTATCAAAAAAACCTGCAACTTTACCTGATTTTCTCCTAACAGCCCTTTCTCTATTCCTCTTCATAACTGCCCCAAAACACCACCTTTCTACCCCTAGACCCATTTCTATCACATACCCATCTCACCCCGCAAACCGACGTTTAATTCGTCTCACTTCAACCACCTCAACAATGTCTCAAAACACTAACCCTAACCCTAATTTCAGCACATTCCCAAATCCTCAATCACTCTCCGATTGGCTTAAACCTCGATTACCCTCCGATTCTTTCGCCACTTGGGGCACAAAACCCGGCACCAAAAACGTCCACAATCTCTGGCTTGAGATTGCTGATGGTGAAACCTCTCTAATTGACACAACCCCACCGGTTAGAAATTTAGAGGTTGTTTGTGTTAGGGTTTTAGGAAAGGATAACAGAAGATTGCTTCTTGAGTCTCATCAAGAGCTCTCTGATGGTTCTATACGTCAAAGAAACAGACCCTTGTCAGAAAAAATGAAAGCTGGTGAGGATATTGAGTCTGCTGTTAGAAGGGCCATTATAGAAGAATTGGGTTCTGTGTTTAATGATAGTAAAGATGTCAACTTTGATGAAATTGTGAGGATTGTGCCTGGTTCTTATAATAGGAGGGTTGAGGAAAGGGTTTCGGTTTCGTATCCGGGTTTGCCAGCTTGTTATGTTTTGCATAGTGTGGATGCTTTTGTGGAAGGATTGCCTGAGGATGAGTTTGTTACTGAGGAAGTTACTGAGTATGGGGATTGTGAATGTGATCAAGGGGTTTCTGAGGGTGCTGTTGCCGTTAAGAAGCATTTTTGGAAGTGGGTTCCTTCGGATTTGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45439.p1 GENE.R_Transcript_45439~~R_Transcript_45439.p1 ORF type:complete len:311 (+),score=59.24 R_Transcript_45439:397-1329(+)
MINMPHQPPPPPHHQPPHQNNSTLHNQSSQFLSKKPATLPDFLLTALSLFLFITAPKHHLSTPRPISITYPSHPANRRLIRLTSTTSTMSQNTNPNPNFSTFPNPQSLSDWLKPRLPSDSFATWGTKPGTKNVHNLWLEIADGETSLIDTTPPVRNLEVVCVRVLGKDNRRLLLESHQELSDGSIRQRNRPLSEKMKAGEDIESAVRRAIIEELGSVFNDSKDVNFDEIVRIVPGSYNRRVEERVSVSYPGLPACYVLHSVDAFVEGLPEDEFVTEEVTEYGDCECDQGVSEGAVAVKKHFWKWVPSDLV*

Click here to download the sequence:
Link to NCBI Protein BLAST