Transcript Information: R_Transcript_454656.p1


Annotated TAIR IDAT1G18260.1
Annotated Gene NameHCP-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6279047-6282008 | Reverse length=678
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41484002169815
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_454656.p1 GENE.R_Transcript_454656~~R_Transcript_454656.p1 ORF type:internal len:88 (+),score=18.63,Sel1|PF08238.8|1.1e-07,Sel1|PF08238.8|0.041,Sel1|PF08238.8|0.033,TPR_11|PF13414.2|3.2e-07,TPR_11|PF13414.2|1.3e-05,TPR_12|PF13424.2|22,TPR_12|PF13424.2|5.8e-05,TPR_12|PF13424.2|0.00035,TPR_1|PF00515.24|6.9e+03,TPR_1|PF00515.24|0.85,TPR_1|PF00515.24|8.6e-05,TPR_1|PF00515.24|10,TPR_8|PF13181.2|1.3,TPR_8|PF13181.2|3.5e-05,TPR_8|PF13181.2|3.3e+02,TPR_7|PF13176.2|0.27,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|3.3e+02,TPR_16|PF13432.2|0.013,TPR_16|PF13432.2|0.05 R_Transcript_454656:1-261(+)
GGCTACTATTATGAAAAGGGAAAGGGAAGTATCGAAAGAGACACCAAAAAAGCAATTGAATATTACACCAAAGCATCCATGTTGGGTAACCACAATGCTGCGAACAGTCTTGGTTCTTTCTATGCTAAGAAGGGAAGTAATGAAAAGGCTCTGCATTACTACCAGAAAGCCGTCAAGCTTGGCAGTGAGGAGGCTCTTAAGAATCTCGGCCTCTTGTACGAGAACGGCAAAGGAATCTCCGTGGATTTGGTCAAGGCCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_454656.p1 GENE.R_Transcript_454656~~R_Transcript_454656.p1 ORF type:internal len:88 (+),score=18.63,Sel1|PF08238.8|1.1e-07,Sel1|PF08238.8|0.041,Sel1|PF08238.8|0.033,TPR_11|PF13414.2|3.2e-07,TPR_11|PF13414.2|1.3e-05,TPR_12|PF13424.2|22,TPR_12|PF13424.2|5.8e-05,TPR_12|PF13424.2|0.00035,TPR_1|PF00515.24|6.9e+03,TPR_1|PF00515.24|0.85,TPR_1|PF00515.24|8.6e-05,TPR_1|PF00515.24|10,TPR_8|PF13181.2|1.3,TPR_8|PF13181.2|3.5e-05,TPR_8|PF13181.2|3.3e+02,TPR_7|PF13176.2|0.27,TPR_7|PF13176.2|0.11,TPR_7|PF13176.2|3.3e+02,TPR_16|PF13432.2|0.013,TPR_16|PF13432.2|0.05 R_Transcript_454656:1-261(+)
GYYYEKGKGSIERDTKKAIEYYTKASMLGNHNAANSLGSFYAKKGSNEKALHYYQKAVKLGSEEALKNLGLLYENGKGISVDLVKAF

Click here to download the sequence:
Link to NCBI Protein BLAST