Transcript Information: R_Transcript_454861.p1


Annotated TAIR IDAT1G56340.1
Annotated Gene Namecalreticulin 1a
Annotated Gene Symbol(s)CRT1, CRT1a, AtCRT1a
Annotation TypeHomolog
Chromosome Positionchr1:21090059-21092630 | Reverse length=425
E-Value3E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4016543975366
Replicate 20.15400709351808
Replicate 30
Condition 2: 8 Hour
Replicate 10.11973528091562
Replicate 20.10934416548257
Replicate 30.044380466064516
Condition 3: 24 Hour
Replicate 10.61744713815341
Replicate 20.16177451508981
Replicate 30.16054551115084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_454861.p1 GENE.R_Transcript_454861~~R_Transcript_454861.p1 ORF type:5prime_partial len:409 (+),score=31.94,Calreticulin|PF00262.14|1e-59,Calreticulin|PF00262.14|1.6e-24 R_Transcript_454861:2-1228(+)
CGTCGTTCACTGCTGTTTGCCGTTGTGGTGCTCGGCCTCCTGGCCGTCGCCACTGCCTCCACCTTCTACAAGGAGGAATTCGACAACTCCTGGTCCTCGCGCTGGGTGCAGTCGGAGCACAAGAAGAGCGAGGGTACCGCTGGTGAGTTGAAGCTCGCCACCGGTGACTGGTTCGGTGACGCTGAGGCGGACAAGGGTGTCCAGACCTCCCAGGATGCGCGCTTCTATGCCTACACCTCCAAGTTCGAGCCGCCCTTCTCGTCGATCGGCAAGGATCTCGTCGTTCAGTTCTCGGTGAAGCACACCCAGAAGATTGACTGCGGCGGTGGCTACATCAAGGTTCTGCCCTCGACGGTCGACCAGGAGAAGTTCAACGGTGATTCGGAGTACTACATTATGTTCGGACCGGATATCTGCGGTACGACGACGAAGAAGGTGCACGTCATCTTCAACTACAAGGGCAAGAATCTTCTGATCAAGAAGGAGATCTCGGCGCCGTCGGACCAGCTCACCCACGTCTTCACCCTCATCGTGAAGAAGGACAACACGTACGAGGTGCTCATCGATGGCGAGTCGAAGCAGTCCGGCCGTCTCGAGGACGACTTCGACTTCCTCCCGCCGAAGATGATCAAGGATCCGAGCGTCTCGAAGCCGTCGGACTGGATCGATGAGCCGCTCATGGACGATCCGTCTGATGTCAAGCCGGCCGACTGGGATTCGACCCCGCGCCAAATCCCGGACCCCGAGGCTACCAAGCCGGAGGACTGGGACGATGAGGCTGATGGCGAGTGGGAGGCGCCGCAGATCGACAACCCGGAGTACAAGGGCGAGTGGAAGGCGAAGCGCATTGCGAACCCGGAGTACAAGGGCAAGTGGCAGCACCCGGAGATCGCCAACCCGGCTTACACCGCCGACGAGACCCTCGGACAGTACCCGGACATCGGCGCCGTTGGCTTTGAGATCTGGCAGGTCAAGGCTGGAACTATCTTCGACAACATCATCCTCACCGACTCGATCGAGGAGGCGAAGTCGTTCCGCGATGCGACCTGGGGTGCGTCGAAGGATGCGGAGAAGTCGAAGTTCGACGCGATCGAGAAGGAGCGTCAGGAGAAGGAGGCTGAGGAGCGTCGCAAGGCCGAGGAGGAGCGCAAGAAGCAGGAGGAGGCGAACAAGGCCTCGGAGGATGAGGACGATGATGAGGAGGAGGAGACGCACGATGAGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_454861.p1 GENE.R_Transcript_454861~~R_Transcript_454861.p1 ORF type:5prime_partial len:409 (+),score=31.94,Calreticulin|PF00262.14|1e-59,Calreticulin|PF00262.14|1.6e-24 R_Transcript_454861:2-1228(+)
RRSLLFAVVVLGLLAVATASTFYKEEFDNSWSSRWVQSEHKKSEGTAGELKLATGDWFGDAEADKGVQTSQDARFYAYTSKFEPPFSSIGKDLVVQFSVKHTQKIDCGGGYIKVLPSTVDQEKFNGDSEYYIMFGPDICGTTTKKVHVIFNYKGKNLLIKKEISAPSDQLTHVFTLIVKKDNTYEVLIDGESKQSGRLEDDFDFLPPKMIKDPSVSKPSDWIDEPLMDDPSDVKPADWDSTPRQIPDPEATKPEDWDDEADGEWEAPQIDNPEYKGEWKAKRIANPEYKGKWQHPEIANPAYTADETLGQYPDIGAVGFEIWQVKAGTIFDNIILTDSIEEAKSFRDATWGASKDAEKSKFDAIEKERQEKEAEERRKAEEERKKQEEANKASEDEDDDEEEETHDEL*

Click here to download the sequence:
Link to NCBI Protein BLAST