Transcript Information: R_Transcript_45500.p1


Annotated TAIR IDAT5G52882.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21434155-21438362 | Reverse length=829
E-Value2.4E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1186.7811748834
Replicate 289.831807210186
Replicate 3140.36895770392
Condition 2: 8 Hour
Replicate 183.492082403304
Replicate 292.419756821713
Replicate 3125.34465967808
Condition 3: 24 Hour
Replicate 1128.33856509778
Replicate 294.864651200101
Replicate 3125.57639326493


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45500.p1 GENE.R_Transcript_45500~~R_Transcript_45500.p1 ORF type:5prime_partial len:571 (+),score=156.15,AAA|PF00004.25|1.3e+03,AAA|PF00004.25|4.3e-39,AAA|PF00004.25|5.3e+03,RuvB_N|PF05496.8|1.1e-05 R_Transcript_45500:2-1714(+)
TCAGAGAAGAGCCCCATTATATTATACATCAGGGACATTGAGAACCTCCTGCTGCAGTCAGACAGGTTATACAATTTGTTCAGTAAATTGATGAAGAGGTTGACCGGTTCAGTCTTGGTTCTTGGGTCTCGCATGTTGGATTCTGAAACTGAATACGGGCATGTGGATGAGAGGCTTACCATGTTATTCCCGTACAATATAGACATAAGGGCACCTGAGGATGAGACTCATCTTGTAAGCTGGAATGCCCAACTTGAAGAGGATATGAAGATGATCAAGTTTCAGGATAACAAGAATCACATTGCTGAGGTTCTAGCAGCTAATGACCTTATCTGCGATGATCTTGCTTCTATCTGCCATGCAGACACAATAACCCTCAGCAATCACATAGATGAGATTGTGATGTCTGCCATATCTTACCATTTGATGAATAACAAAGAGCCAGAGTACCGAAATGGGAAACTTGTCATATCATCCAACAGTTTGTCCCATGGTTTGAGTATATTCCAGGAAGGGAAAAATTCAGGCAAAGCTAAAATGGAAACGAATGGAGAAACTGGCAAGGAAATGGACGATGCTGCTGCAGTGAAGCCAGAGGGGAAGTCTGATAACTCTGCATCTGATAACAAAAATGACATAGACAAATCGGTGCCCTTGTCAAAGGGTGCTGAAAGTGCAGCCCCTGTCAAGGAAGTTCCCCCTGACAATGAATTTGAGAAGCGCATTAGACCCGAGGTTATTCCTGCAAGTGAGATTGGAGTAACATTTGCTGATATTGGAGCTTTAGACGACATCAAAGAGTCACTTCAGGAACTTGTGATGCTTCCCCTCAGAAGGCCAGACCTGTTTAAGGGTGGGCTTTTGAAGCCCTGCAGAGGTATTCTGCTGTTTGGCCCTCCTGGTACTGGGAAGACAATGTTGGCCAAGGCTATTGCCAATGAGGCTGGAGCAAGCTTCATCAATGTCTCCATGTCGACAATTACCTCGAAATGGTTTGGAGAGGATGAAAAGAATGTTCGGGCATTATTCACACTTGCTGCTAAAGTTGCCCCTACAATCGTTTTCATTGATGAGGTGGACAGTATGCTTGGCCAGAGAACCCGAGTTGGGGAGCACGAGGCTATGAGGAAAATAAAGAATGAGTTTATGACCCATTGGGATGGATTGATGACCAAGCCTGGTGAACAAATTCTCGTTCTTGCTGCCACCAACAGACCATTTGACCTTGACGAAGCCATAATTAGGCGTTTTGAGCGCAGAATAATGGTGGGTTTGCCAAGCATAGAGAACAGAGAGAAGATCTTGAGAACTCTTCTGTCAAAGGAGAAGACAGAGGATCTGGACTTTCAGGAGCTTGCTACCATGACTGAGGGATACACTGGAAGTGATCTAAAGAATCTGTGTATCACTGCTGCATATCGGCCTGTCCGGGAACTGATCCAGAAGGAGAGAAAAAAAGATTTGGACAGGAAGAAAAGAGCCCAAGAAAACAAGGATTCAGCAGAGGCTTCACCTGAGACAAACGAAGTGAAGAAGGAAGAGGAACCGATTGTTCTGAGATCTTTGAACATGGAAGATTTGAGGCAAGCAAAGAGTCAGGTTGCTGCCAGTTTTGCTTCCGAGGGAGCAGTGATGAATGAACTGAAGCAGTGGAACGAGCTGTATGGAGAAGGCGGCACAAGGAAGAAGCAGCAGCTTACTTACTTCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45500.p1 GENE.R_Transcript_45500~~R_Transcript_45500.p1 ORF type:5prime_partial len:571 (+),score=156.15,AAA|PF00004.25|1.3e+03,AAA|PF00004.25|4.3e-39,AAA|PF00004.25|5.3e+03,RuvB_N|PF05496.8|1.1e-05 R_Transcript_45500:2-1714(+)
SEKSPIILYIRDIENLLLQSDRLYNLFSKLMKRLTGSVLVLGSRMLDSETEYGHVDERLTMLFPYNIDIRAPEDETHLVSWNAQLEEDMKMIKFQDNKNHIAEVLAANDLICDDLASICHADTITLSNHIDEIVMSAISYHLMNNKEPEYRNGKLVISSNSLSHGLSIFQEGKNSGKAKMETNGETGKEMDDAAAVKPEGKSDNSASDNKNDIDKSVPLSKGAESAAPVKEVPPDNEFEKRIRPEVIPASEIGVTFADIGALDDIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIVFIDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLMTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSIENREKILRTLLSKEKTEDLDFQELATMTEGYTGSDLKNLCITAAYRPVRELIQKERKKDLDRKKRAQENKDSAEASPETNEVKKEEEPIVLRSLNMEDLRQAKSQVAASFASEGAVMNELKQWNELYGEGGTRKKQQLTYFL*

Click here to download the sequence:
Link to NCBI Protein BLAST