Transcript Information: R_Transcript_455344.p1


Annotated TAIR IDAT5G54080.1
Annotated Gene Namehomogentisate 1,2-dioxygenase
Annotated Gene Symbol(s)HGO
Annotation TypeHomolog
Chromosome Positionchr5:21945920-21948070 | Forward length=461
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5210800795599
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_455344.p1 GENE.R_Transcript_455344~~R_Transcript_455344.p1 ORF type:3prime_partial len:96 (+),score=23.95,HgmA|PF04209.9|1.9e-20 R_Transcript_455344:23-286(+)
ATGAAAGAAACTACCAAAATTGATTGGAACAATTTGAAGTATTTCAGTGGAATCAACAATGTGCATTCCTCTGAGGCCCTGGAAGATGCTCTCCCAAAAGATCAGAACCTCCCACAGAAGTTTCCCTATGGACTTTTGCCTGAAATGATAAATGGTACCACTTTTACTACTGTCAGATCTGAGAACAAATACAGCTGGATGTACAGAATCTTGCCTTCCAACAGATTTCAGGAGTACAAGAAGATCGACAAGGGATTGATGAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_455344.p1 GENE.R_Transcript_455344~~R_Transcript_455344.p1 ORF type:3prime_partial len:96 (+),score=23.95,HgmA|PF04209.9|1.9e-20 R_Transcript_455344:23-286(+)
MKETTKIDWNNLKYFSGINNVHSSEALEDALPKDQNLPQKFPYGLLPEMINGTTFTTVRSENKYSWMYRILPSNRFQEYKKIDKGLMR

Click here to download the sequence:
Link to NCBI Protein BLAST