Transcript Information: R_Transcript_45535.p1


Annotated TAIR IDAT4G11820.2
Annotated Gene Namehydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase
Annotated Gene Symbol(s)MVA1, FKP1
Annotation TypeOrtholog
Chromosome Positionchr4:7109124-7111901 | Reverse length=461
E-Value2.7E-287
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 163.538788133515
Replicate 261.166437559957
Replicate 362.423966649913
Condition 2: 8 Hour
Replicate 147.820495737839
Replicate 245.530475503029
Replicate 355.439548531345
Condition 3: 24 Hour
Replicate 185.10579532874
Replicate 289.975884370963
Replicate 369.264888249675


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45535.p1 GENE.R_Transcript_45535~~R_Transcript_45535.p1 ORF type:5prime_partial len:553 (+),score=99.46,HMG_CoA_synt_C|PF08540.6|1.4e-116,HMG_CoA_synt_N|PF01154.13|5.8e-82 R_Transcript_45535:1-1659(+)
ATAAATGGGGAGGAAGGAGGGAGTCTATATATACGCCGTGTTCCCCCAACGGAATTCCCCCAAAACCAAAACCCAAAATTCCTCTACTCTCTTCTCTTCTCTTCTCTCCTCTCATCTACCCACCCCCTGATTGCTCTGCTGGACCTCCCGTATTCTCTCTCTCTCTCCCCATCTAATTTTTACTATCAGCTGTCGTTGTCACCGAGGTATCCTCTCCAAGAAAACATCTTTGATCTATTTGTCATCAACTTAACAATGGCCAAGAATGTGGGAATTCTTGCTCTTCAAATCTACTTCCCCCCTACCTCTGTTCAACAGGAAGCATTGGAGGTTCATGATGGAGTTAGCAAAGGGAAATACACCATTGGACTTGGACAAGACTGCATGGCGTTTTGTACCGAGGTTGAAGACATCATCTCCATGAGTTTGACAGCTGTGACATCTCTCCTTGAGAAATATCAGATTGATCCGAAACAAATTGGTCGTCTGGAAGTAGGAAGTGAGACTGTCTTAGATAAGAGCAAATCTATCAAGACATTCTTGATGCAAATATTTGAGGAGCATGGAAATACAGACATTGAAGGTGTTGACTCGACCAATGCATGCTATGGAGGAACTGCTGCATTATTTAACTGTGTGAATTGGGTGGAGAGCAGTTCATGGGATGGACGTTATGGTCTGGTTGTATGTACAGACAGTGCGGTCTATGCTGAGGGACCAGCTCGTCCCACTGGAGGGGCTGCCGCTATTGCGATGCTCGTGGGGCCAGATGCTCCCATTGCTTTTGAAAGCAAATTGAGGGGCAGTCATATGGCTCATGCTTATGACTTTTACAAGCCCAACTTAGCTAGTGAATACCCAGTTGTTGACGGGAAGTTGTCACAAACTTGTTACCTCATGGCAGTTGATTCTTGCTACAAACACTTCTGCAGCAAGTATGAGAAGTTTGAAGGTAAGCAATTCTCCATCAACGATGCCGACTATGTTGTGTTCCATTCTCCTTACAACAAGCTAGTGCAAAAGAGCTTTGCCCGATTAATGTACAATGATTTCTTGAGGAATGCCAGCTCCGTCAATGAAGAGGCTAAGGAGAAGCTGTCCCCATTTTCTAACCTATCTAGCGATGAAAGCTACCAAAGCAGGGATCTTGAGAAGGTATCCCAGCAAATTGCAAAGCCTTTGTATGATGAGAAGGTGCAACCAACCACTTTGATACCAAAGCAAATTGGCAACACTTACACAGCATCCTTATACACGGCGTTTGCTTCGCTTCTTCACAACAAGCATAGCACACTGGCGGGCAGCAGGGTGATTATGTTCTCTTATGGAAGTGGTTTGACGGCTACAATGTTCTCACTCCGGTTAAATGAGGGTCAAAACCCATTTAGCTTGTCAAACATTGCAGCAGTTATGGATGTTGCAGACAAATTGAAGTCAAGGCATGAGTTCCCACCTGAGAAATTCGTCGAAACCCTGAAGCTAATGGAGCACAGGTATGGTGCAAAAGACTTTGTGACCAGCAAAGATACCAGCCTTTTGGCTCCAGGAACCTACTACCTGACCGAGGTGGACTCTATGTACCGTAGATTCTATGCCAAGAAACCAACAAATGATGCTATCATGGCCTCTGAGAATGGTTTGGTCACCAATGGTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45535.p1 GENE.R_Transcript_45535~~R_Transcript_45535.p1 ORF type:5prime_partial len:553 (+),score=99.46,HMG_CoA_synt_C|PF08540.6|1.4e-116,HMG_CoA_synt_N|PF01154.13|5.8e-82 R_Transcript_45535:1-1659(+)
INGEEGGSLYIRRVPPTEFPQNQNPKFLYSLLFSSLLSSTHPLIALLDLPYSLSLSPSNFYYQLSLSPRYPLQENIFDLFVINLTMAKNVGILALQIYFPPTSVQQEALEVHDGVSKGKYTIGLGQDCMAFCTEVEDIISMSLTAVTSLLEKYQIDPKQIGRLEVGSETVLDKSKSIKTFLMQIFEEHGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLVGPDAPIAFESKLRGSHMAHAYDFYKPNLASEYPVVDGKLSQTCYLMAVDSCYKHFCSKYEKFEGKQFSINDADYVVFHSPYNKLVQKSFARLMYNDFLRNASSVNEEAKEKLSPFSNLSSDESYQSRDLEKVSQQIAKPLYDEKVQPTTLIPKQIGNTYTASLYTAFASLLHNKHSTLAGSRVIMFSYGSGLTATMFSLRLNEGQNPFSLSNIAAVMDVADKLKSRHEFPPEKFVETLKLMEHRYGAKDFVTSKDTSLLAPGTYYLTEVDSMYRRFYAKKPTNDAIMASENGLVTNGY*

Click here to download the sequence:
Link to NCBI Protein BLAST