Transcript Information: R_Transcript_45538.p1


Annotated TAIR IDAT5G49930.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)emb1441
Annotation TypeOrtholog
Chromosome Positionchr5:20308260-20312736 | Reverse length=1080
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.248730137435
Replicate 27.3700541691161
Replicate 38.9115513194581
Condition 2: 8 Hour
Replicate 19.3959906163611
Replicate 211.2298681572
Replicate 313.51340065638
Condition 3: 24 Hour
Replicate 111.326663512873
Replicate 29.0678120107148
Replicate 311.901802283326


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45538.p1 GENE.R_Transcript_45538~~R_Transcript_45538.p1 ORF type:complete len:1131 (+),score=331.40,FbpA|PF05833.7|9e-17,FbpA|PF05833.7|2.5e-12,DUF3441|PF11923.4|6.8e+03,DUF3441|PF11923.4|5.6e+03,DUF3441|PF11923.4|1.4e-25,DUF814|PF05670.9|3.7e-25,zf-CCHC|PF00098.19|9.4e-06 R_Transcript_45538:277-3669(+)
ATGGTGAAGGTACGAATGAACACGGCCGATGTGGCCGCTGAAGTCAAGTGCCTTCGTAAATTGATCGGCATGCGTTGTTCCAACGTCTACGACATCACCCCTAAGACTTATTTGTTCAAGTTGATGAATAGTAGTGGAGTCACTGAATCTGGTGAGAGTGAGAAGGTTTTGTTGTTGATGGAGAGTGGTGTTAGGCTTCATACAACTGCCTATGTGAGGGATAAGAGTAATACACCATCTGGGTTTACTCTTAAATTGAGGAAACATATTCGTACGAAAAGGCTTGAAGATGTGAGGCAGCTTGGATATGATAGGATTATTCTTTTCCAATTTGGACTTGGTGCAAATGCATATTATGTGATACTGGAGTTATATGCTCAAGGGAATATTATTCTTGCAGATCCTGAATTCACAGTCATGACCCTTCTCAGGTCTCATAGAGATGATGATAAAGGTTTTGCAATCATGTCTCGACATCGTTACCCAATTGAAGCTTGCCGAGTTTTTGAGCGAAGTACCACTGCTAAGTTGAAGGAAGCTCTTGAATCTTCGAAGGATATGAGAGAAGATGAGCAAGTCGAACTTAAAGATAATGGAAGCAATGTCCCAAGTGCAATGAAAGCAAAACAAAATGGTAAAAAGGGTGGAAAGGTTCCTGATGCAAACAAGTCTGGAAATGATGGTGGTCGTGGTAAACAGCGCACATTGAAGATGGTCCTTGGAGAAGGCTTAGGCTATGGTCCTCAACTATCAGAACATATGATATTGGATGCAGGTCTGGTTCCAAGCGATAAAATTTCCAAAGATGACAAGCTAGATGAGGATAAAGTTCAGGTTTTAGCCCAAGCAGTTGGAAGGTTTGAGGACTGGTTAGAGGATGTTATCGTTGGTATTAAGGTTCCTGAGGGATACATTTTGATGCAGACAAAGAAGCCTGGGGAGAAGGAACTCAAGATCTATGATGAATATTGTCCCATCTTACTAAATCAGTTCAAATCAAGGGAGTTTGTGAAGTTTGAGACATTTGATGCAGCTTTGGATGAATTTTACAGTAAGATTGAGAGTCAACGAGCAGAACAGCAGCAGAAAGCAAAAGAAGGATCTGCTGCGCAAAAGCTTAATAAAATACGCACGGACCAGGAAAATCGTGTGCTTACATTGAAAAAAGAAGTCGAGCATTGCGTTAAAATGGCACAGTTAATTGAATATAACTTGGAGGATGTTGATGCTGCTATATTGGCTGTCCGTGTTGCTCTTGCAAATGGTATGAATTGGGATGATCTTGCACGCATGGTGAAAGAAGAGAAGAAGTCTGGAAATCCAGTGGCTGGTCTGATTGACAAGCTTCATCTGGAAAAGAACAGCATGACACTACTGTTGAGCAACAATCTTGATGAAATGGATGATGATGAAAAGACACTACCTGCAGATAAGGTAGAAGTTGATCTGTCTCTCTCAGCACATGCTAATGCTCGTCGGTGGTATGAAATGAAGAAAAAGCAGGAGAGCAAACAAGAAAAGACTATCACAGCTCATGAAAAGGCTTTTAAAGCTGCTGAAAAAAAGACCCGTCTCCAACTTTCACAGGAAAAAACAGTTGCCACAATTTCTCATATGCGTAAAGTCCATTGGTTTGAAAAATTCAATTGGTTTATTAGTAGTGAGAATTATCTGGTTATTAGTGGACGTGATGCACAGCAAAATGAGATGATTGTGAAGCGTTATATGTCAAAAGGGGACCTGTATGTCCATGCTGAACTTCATGGAGCTTCGAGTACTGTAATCAAGAATCATAGGCCTGAGCAGCCAGTTCCCCCTTTGACATTGAACCAAGCTGGGTGTTTTACTGTTTGCCACAGTCAGGCATGGGATTCAAAAATTGTCACCAGTGCTTGGTGGGTGTACCCTCATCAAGTAACTAAATCTGCTCCTACAGGAGAATATCTTACTGTAGGAAGCTTCATGATCCGTGGGAAGAAGAATTTTCTTCCTCCTCATCCGCTTATTATGGGATTTGGTTTGCTATTTCGTGTGGACGAGTCTTCTTTGGGTTTGCACTTAAATGAAAGACGAGTAAGAGGGGAAGATGAGGCATCAGATATTCTCAAAGAAAGTGCCAAGGCAGAAATATCTGGTTCTGAGTCAGATGATGAAGTTACTCAGCAAAAAGTTGAGATAGATGACAGGAGTAGTACTCAGTCATCGACAGAAAATCAATCAGCACCCTCAGAAGCATCCTTGTATTTTAGTTCTGCTGTAAATGGCAATATCTCCAATTCCAAAATAGAAGATTCAGAAAAGAAATTTGGCACTGTGAATGAGTCTACTGATTCAGCACATGATTCTGATGGAAAGAACAATGCTTCAGTTCCACATGAACTTGAGGATCTCATTGATAGAGCGCTTGAGCTTGGACCTGGAAAAGTTTCACGTGGGAAATTTGAACAGACTTCTCAGCTGAATCAGTCTGAGGAACCCACACCTAAGGAGGAAAGGCTTGCTGTCAGAGAGAAGCCCCATGTTTCCAAAGCTGAAAGGAGGAAACTAAAGAAAGGCCAGAAAACCGGTGATGGGCTGGCTGCTTCACCAGGAACAGAAGATGATAATACTCCTTCAATCAGCCAGCCTGACAAGAAAGGTCCATCAGCAGCCGGTAGGAAAATTGCTCGTGGCCAGAGGGGTAAGCTCAAAAAGATAAAAGAGAAGTATGCCGACCAGGATGAGGAGGAAAGAAGAATTCGCATGGCTTTACTTGCTTCTGCAGGAACGGTTAACAAGAGTGAAGATGACGCCCAAGATCAAAATGTAGCAACAAAAACAGGAAATGAATCTGGCGCCGGTCCTGAAAATGCTCCAAAAATATGTTACAAGTGTAAGAAGGTTGGTCATCTTTCCCGTGAATGTACAGAACATCTAGGAGAATTTTCACGTGGCCACACAAATGGTATGCTTGCGAATCGTGGTGGAGATTTGGGAAATGCTGCTGCCGAGATACAGCAGATAGAGATGGAGGAGGAAGATATTCATGAGATAGGTGAAGAAGAGAAAGGAAAACTGAACGATGTGGACTACTTGACTGGTAATCCACTCCCCAATGATGTTCTTTTGTATGCCGTGCCTGTCTGTGGTCCTTACAATGCACTGCAAACATACAAATACCGCGTGAAGATTGTTCCTGGTACAGCAAAGAAAGGAAAAGCTGCAAAAACTGCTATGAATTTGTTTGGTCACATGCCTGAAGCAACCACCCGAGAGAAGGAACTAATGAAGGCATGTACTGATCCTGAATTGGTTGCGGCAATGATTGGAAATGTAAAGATTACAGCTGCAGGGCTGACTCAACTGAAGCAGAAGCAAAAGAAAGGGAAGAAGGCTAGCAAAAATGGGAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45538.p1 GENE.R_Transcript_45538~~R_Transcript_45538.p1 ORF type:complete len:1131 (+),score=331.40,FbpA|PF05833.7|9e-17,FbpA|PF05833.7|2.5e-12,DUF3441|PF11923.4|6.8e+03,DUF3441|PF11923.4|5.6e+03,DUF3441|PF11923.4|1.4e-25,DUF814|PF05670.9|3.7e-25,zf-CCHC|PF00098.19|9.4e-06 R_Transcript_45538:277-3669(+)
MVKVRMNTADVAAEVKCLRKLIGMRCSNVYDITPKTYLFKLMNSSGVTESGESEKVLLLMESGVRLHTTAYVRDKSNTPSGFTLKLRKHIRTKRLEDVRQLGYDRIILFQFGLGANAYYVILELYAQGNIILADPEFTVMTLLRSHRDDDKGFAIMSRHRYPIEACRVFERSTTAKLKEALESSKDMREDEQVELKDNGSNVPSAMKAKQNGKKGGKVPDANKSGNDGGRGKQRTLKMVLGEGLGYGPQLSEHMILDAGLVPSDKISKDDKLDEDKVQVLAQAVGRFEDWLEDVIVGIKVPEGYILMQTKKPGEKELKIYDEYCPILLNQFKSREFVKFETFDAALDEFYSKIESQRAEQQQKAKEGSAAQKLNKIRTDQENRVLTLKKEVEHCVKMAQLIEYNLEDVDAAILAVRVALANGMNWDDLARMVKEEKKSGNPVAGLIDKLHLEKNSMTLLLSNNLDEMDDDEKTLPADKVEVDLSLSAHANARRWYEMKKKQESKQEKTITAHEKAFKAAEKKTRLQLSQEKTVATISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHAELHGASSTVIKNHRPEQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVTKSAPTGEYLTVGSFMIRGKKNFLPPHPLIMGFGLLFRVDESSLGLHLNERRVRGEDEASDILKESAKAEISGSESDDEVTQQKVEIDDRSSTQSSTENQSAPSEASLYFSSAVNGNISNSKIEDSEKKFGTVNESTDSAHDSDGKNNASVPHELEDLIDRALELGPGKVSRGKFEQTSQLNQSEEPTPKEERLAVREKPHVSKAERRKLKKGQKTGDGLAASPGTEDDNTPSISQPDKKGPSAAGRKIARGQRGKLKKIKEKYADQDEEERRIRMALLASAGTVNKSEDDAQDQNVATKTGNESGAGPENAPKICYKCKKVGHLSRECTEHLGEFSRGHTNGMLANRGGDLGNAAAEIQQIEMEEEDIHEIGEEEKGKLNDVDYLTGNPLPNDVLLYAVPVCGPYNALQTYKYRVKIVPGTAKKGKAAKTAMNLFGHMPEATTREKELMKACTDPELVAAMIGNVKITAAGLTQLKQKQKKGKKASKNGS*

Click here to download the sequence:
Link to NCBI Protein BLAST