Transcript Information: R_Transcript_455413.p1


Annotated TAIR IDAT1G21720.1
Annotated Gene Nameproteasome beta subunit C1
Annotated Gene Symbol(s)PBC1
Annotation TypeHomolog
Chromosome Positionchr1:7626394-7628070 | Forward length=204
E-Value5E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62632709158349
Replicate 20.72046128879454
Replicate 30
Condition 2: 8 Hour
Replicate 10.1200287497414
Replicate 20.21922433177633
Replicate 30
Condition 3: 24 Hour
Replicate 10.11253827072404
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_455413.p1 GENE.R_Transcript_455413~~R_Transcript_455413.p1 ORF type:5prime_partial len:204 (+),score=44.76,Proteasome|PF00227.22|3.2e-42 R_Transcript_455413:2-613(+)
TCTCTTACTTATAATGGTGGTGCATGTGTTGCAATGAAAGGAAAAAATTGTGTTGCAATAGCATCTGATATGAGATATGGTATTCAAGCACAAACCGTGGCAACCAATTTCCCAAAAGTATATAAAATGAATGACAAGACTGTGGTGGGACTTGTTGGGCTTGCAACTGATCAACAAACATTGAGAGAATTGATTAAGTTCAGAATGAATTTGTATAAACTTAGAGAAGGAAGAGAAATGAGAACATCAGTCTGCTCAAACATGATTGCAAACATTTTGTATTCAAGAAGATTTTCTCCTTATTTCATCGAACCTGTCGTCGCAGGATTGGATGGACCTGAAAACAAACCTTTCATCTCTGCTTACGATTTGATTGGAGCTGGTTTGTTTGCAGATGACTTTGTTGTCTCTGGATCTCCTACTGAGGCTTTGTATGGTATGTGTGAGAGTTTGTATAAACCAGATATGGAGCCTGATGATCTTTTTGAGGTCATCTCCCAATGTCTCCTCGCTTCTGTCGATAGAGATGCTATTTCTGGATGGGGTGGTATTGTTCACATCATTACTAAAGATGGAATCATCACCAAAGAGTTGAAAGGAAGAATGGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_455413.p1 GENE.R_Transcript_455413~~R_Transcript_455413.p1 ORF type:5prime_partial len:204 (+),score=44.76,Proteasome|PF00227.22|3.2e-42 R_Transcript_455413:2-613(+)
SLTYNGGACVAMKGKNCVAIASDMRYGIQAQTVATNFPKVYKMNDKTVVGLVGLATDQQTLRELIKFRMNLYKLREGREMRTSVCSNMIANILYSRRFSPYFIEPVVAGLDGPENKPFISAYDLIGAGLFADDFVVSGSPTEALYGMCESLYKPDMEPDDLFEVISQCLLASVDRDAISGWGGIVHIITKDGIITKELKGRMD*

Click here to download the sequence:
Link to NCBI Protein BLAST