Transcript Information: R_Transcript_45557.p1


Annotated TAIR IDAT1G43190.1
Annotated Gene Namepolypyrimidine tract-binding protein 3
Annotated Gene Symbol(s)PTB3
Annotation TypeOrtholog
Chromosome Positionchr1:16275432-16278185 | Reverse length=432
E-Value9.1E-261
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.548451290976
Replicate 225.525839382511
Replicate 328.672028856308
Condition 2: 8 Hour
Replicate 128.667720533741
Replicate 237.284886126202
Replicate 339.403271593919
Condition 3: 24 Hour
Replicate 137.506350234923
Replicate 230.579988169632
Replicate 338.266593812149


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45557.p1 GENE.R_Transcript_45557~~R_Transcript_45557.p1 ORF type:complete len:445 (+),score=79.15,RRM_5|PF13893.2|1.8e-07,RRM_5|PF13893.2|4.2e-09,RRM_5|PF13893.2|48,RRM_5|PF13893.2|3.5e-10,RRM_5|PF13893.2|3.8e-06,RRM_6|PF14259.2|2.6e-07,RRM_6|PF14259.2|2.1e+03,RRM_6|PF14259.2|0.04,RRM_6|PF14259.2|9e-07,RRM_6|PF14259.2|1.8e-08,RRM_1|PF00076.18|1.3e-06,RRM_1|PF00076.18|0.0068,RRM_1|PF00076.18|7.1e-06,RRM_1|PF00076.18|3.2e-09,RRM_occluded|PF16842.1|0.053,RRM_occluded|PF16842.1|38,RRM_occluded|PF16842.1|25,RRM_occluded|PF16842.1|0.0051 R_Transcript_45557:261-1595(+)
ATGGCAGAACCTTCTAAGGTTATCCATGTACGCAATGTTGGCCATGAAATATCTGAGAATGATTTGCTTCAGCTATTCCAACCCTTTGGAGCTATTACCAAACTTGTGATGTTGCGTGCAAAGAATCAGGCTCTTGTGCAAATGCAAGACGTTGCCTCGGCCATCAGTGTGCTGGAGTTCTTTACAAATGTGCAGCCAAGCATAAGGGGACGGAATGTTTATGTTCAATATTCTTCACATCAAGAATTAACAACAATGGATCAGAATGCTCATGGGCGAGGAGATGAGCCCAATCGAATTCTCTTAGTTACAATTCATCAAATGCTATATCCAATTAACGTGGACGTGCTGCATCAAGTTTTTTCTCCCCATGGATTTGTGGAGAAGATTGTCACATTTCAGAAGTCAGCGGGTTTCCAAGCCCTGATCCAGTATCAATCACGGCAGAGTGCAGTTACTGCAAGGAATTTGCTTCAGGGACGCAATATCTATGATGGTTGTTGCCAGTTGGATATACAATACTCGAATCTTGAAGAATTGCAAGTACACTATAACAATGAACGGACGAGGGATTTTACAAATCCAACATTGCCTTCAGAATCAAAAGGCAGGGCTTCTCAGCCTGGTTATGTAGATGGTGCTGGTATCTATTCAATTCCAACTTCTGGAGCTCCTGCAGCTGCATTTTCACAGATGGCCAACCATGCAGCTATTGCAGCTGCTTTTGGAGGTGTTTTCCCTCCTGTAATATCTGGAATAAATGACAGATGTACAATCCTTGTGTCTAACCTTAATCCTGATAGGATAGATGAGGATAAACTTTTTAATTTATTCTCTCTCTATGGGAACATTGTGAGAATCAAACTCCTTCGTAGCAAACCTGATCACGCCTTAGTGGAAATGGGTGATGGCTTCCAATCCGAAATGGCAGTACACTTTCTAAAGGGTGCGATGCTCTTTGGCAAGCGATTGGATGTCAACTTCTCTAGATACCCTAACATTACATCAGGTGCTGACACCCATGAATATCTCAACTCAAATCTTAATCGATTCAACCGCAATGCTGCCAAAAATTACCGCTACTGCTGTTCTCCGACAAAAATGATCCACCTATCCACCCTCCCCCAGGACATCTCCGAGGAAGAAATAGTGAGCCACTTGGAGGAGCATGGCACCATTGTCAATACCAAACTTTTTGAGACCAATTGTAAGAAGCAAGCCCTTGTCTTGTTTGAAAATGAGGAGCAGGCAACTGAAGCCCTGGTGTGCAAGAACGCAAGCAACCTTGGTGGCTCTGTCATACGCATTTCATTCTCCCAGTCACAGGCAATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45557.p1 GENE.R_Transcript_45557~~R_Transcript_45557.p1 ORF type:complete len:445 (+),score=79.15,RRM_5|PF13893.2|1.8e-07,RRM_5|PF13893.2|4.2e-09,RRM_5|PF13893.2|48,RRM_5|PF13893.2|3.5e-10,RRM_5|PF13893.2|3.8e-06,RRM_6|PF14259.2|2.6e-07,RRM_6|PF14259.2|2.1e+03,RRM_6|PF14259.2|0.04,RRM_6|PF14259.2|9e-07,RRM_6|PF14259.2|1.8e-08,RRM_1|PF00076.18|1.3e-06,RRM_1|PF00076.18|0.0068,RRM_1|PF00076.18|7.1e-06,RRM_1|PF00076.18|3.2e-09,RRM_occluded|PF16842.1|0.053,RRM_occluded|PF16842.1|38,RRM_occluded|PF16842.1|25,RRM_occluded|PF16842.1|0.0051 R_Transcript_45557:261-1595(+)
MAEPSKVIHVRNVGHEISENDLLQLFQPFGAITKLVMLRAKNQALVQMQDVASAISVLEFFTNVQPSIRGRNVYVQYSSHQELTTMDQNAHGRGDEPNRILLVTIHQMLYPINVDVLHQVFSPHGFVEKIVTFQKSAGFQALIQYQSRQSAVTARNLLQGRNIYDGCCQLDIQYSNLEELQVHYNNERTRDFTNPTLPSESKGRASQPGYVDGAGIYSIPTSGAPAAAFSQMANHAAIAAAFGGVFPPVISGINDRCTILVSNLNPDRIDEDKLFNLFSLYGNIVRIKLLRSKPDHALVEMGDGFQSEMAVHFLKGAMLFGKRLDVNFSRYPNITSGADTHEYLNSNLNRFNRNAAKNYRYCCSPTKMIHLSTLPQDISEEEIVSHLEEHGTIVNTKLFETNCKKQALVLFENEEQATEALVCKNASNLGGSVIRISFSQSQAI*

Click here to download the sequence:
Link to NCBI Protein BLAST