Transcript Information: R_Transcript_455697.p1


Annotated TAIR IDAT5G05810.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)ATL43
Annotation TypeOrtholog
Chromosome Positionchr5:1746938-1747999 | Forward length=353
E-Value1.1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22534519697184
Replicate 20.77764075615919
Replicate 30
Condition 2: 8 Hour
Replicate 10.30229462897834
Replicate 21.3803013482213
Replicate 30.44818791655277
Condition 3: 24 Hour
Replicate 10.56685943772109
Replicate 20
Replicate 30.27021857638145


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_455697.p1 GENE.R_Transcript_455697~~R_Transcript_455697.p1 ORF type:internal len:81 (-),score=-2.60,zf-RING_2|PF13639.2|6.2e-15,zf-RING_11|PF17123.1|6.1e-12,zf-RING_11|PF17123.1|1.9e+03,zf-rbx1|PF12678.3|2.8e-08,zf-C3HC4|PF00097.21|7.9e-08,zf-C3HC4_2|PF13923.2|3.2e-07,zf-ANAPC11|PF12861.3|4.4e-06,zf-RING_5|PF14634.2|5.9e-06 R_Transcript_455697:2-241(-)
TTGGAGTGCGCGGTTTGTTTAAACCGCTTTGAACCGGCTGAGGTGTTGCGGTTGTTGCCTAAGTGTAAGCATGCTTTCCACGTGGAATGTGTTGACACGTGGCTTGACGCTCATTCCACTTGCCCGCTTTGCCGGTTCAGGGTTGACCCCGAGGACGTTCTTTTAGTCGACCGGTGGAGCGCGGTCGAGCCGGATGAGGAGAGCCAACTCGGTGGTTCTGAGTCGACTCACCGGGTCTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_455697.p1 GENE.R_Transcript_455697~~R_Transcript_455697.p1 ORF type:internal len:81 (-),score=-2.60,zf-RING_2|PF13639.2|6.2e-15,zf-RING_11|PF17123.1|6.1e-12,zf-RING_11|PF17123.1|1.9e+03,zf-rbx1|PF12678.3|2.8e-08,zf-C3HC4|PF00097.21|7.9e-08,zf-C3HC4_2|PF13923.2|3.2e-07,zf-ANAPC11|PF12861.3|4.4e-06,zf-RING_5|PF14634.2|5.9e-06 R_Transcript_455697:2-241(-)
LECAVCLNRFEPAEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRFRVDPEDVLLVDRWSAVEPDEESQLGGSESTHRVS

Click here to download the sequence:
Link to NCBI Protein BLAST