Transcript Information: R_Transcript_45574.p1


Annotated TAIR IDAT3G17205.1
Annotated Gene Nameubiquitin protein ligase 6
Annotated Gene Symbol(s)UPL6
Annotation TypeOrtholog
Chromosome Positionchr3:5873528-5881132 | Forward length=1029
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.065205150006
Replicate 28.7806406387616
Replicate 312.528854541942
Condition 2: 8 Hour
Replicate 110.050345341367
Replicate 211.88395366003
Replicate 315.709138329744
Condition 3: 24 Hour
Replicate 113.290192373831
Replicate 210.120225279897
Replicate 312.75546778462


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45574.p1 GENE.R_Transcript_45574~~R_Transcript_45574.p1 ORF type:complete len:1033 (+),score=187.77,HECT|PF00632.21|1.3e-92 R_Transcript_45574:280-3378(+)
ATGTTTTTCTCAGGTGATCCATCAACACGTAAGCGAGTTGATTTAGGAGGTCGAAGTTCGAAAGAAAGAGACAGGCAAAAGCTTTTGGAGCAAACTCGGCTGGAGCGAAATCGCCGTCTCTTTCAACGTCAGCAGACCTCTGCTGCTATCAAAATTCAGAAATGCTTCAGAGCTAGGAGGGCTGTGGAAGCTGAACATCATAGGATACGGGAGCAGTTTTTCATCACATATGGGAGGCGCTGCCAGAATGTCGACCGATCTTGTTTTGGCCCAGATTCAAAATTTCTCCGTGAATTATTGTTTTTCTTCAATCCTAAAAATGAGGATGACCTTTTTGCCCTTGCGGAGACTTGTCAAGGGCTTCAACAATTTGTTAAAGATAATGGTGACCTCATCAGCCTCTTTTCTGGCAACGACTATTTGTCAAACCATAGTCTTGTGGATTATCGAGTCAAGCGTTTGACTTATGCTTGTGTTTTGGCTGTTCATTCAAAGAGAAATCAATTCAACGGACAACTATTGCTGTCACATCTGAATTCTCACATCTCAACAGTTCTGCTGGAAGCTGCTGATAAGTTAATTGATCCCAAACTTCCATGGGCTTGCAAGATAGTTTGCTACCTTTTGCGAAGAAATACCTTTAGCATGTTGAGAGATATAACTCTTACTGCCAAGGAAAGTTTTCAGACTCACAATTCGTTAGAGGTTTCCTCTCTGGAGCATTTGCTTTCCCGTATTTTACCACATGTTGGTGAAAAGCCATGTATATGCCAAAATGCTGATCAATGGTGGAGCTTCTCTTCGCAAGTTCTTACAATACCATTCGTGTGGAAAATCTTTCCACACCTAAAAGAGGTCTTTGCTAGGCAGCAGTTGAGCAAGCATTATGTGCATCAGATGGCATTGTCTGTGAAAAGTCACAATCATGTTCTATCAAATGATGTCTCGCTTGAATATCCGAGTCATGCTTGTCTTCTTGGAAATATATTGGAAGCTGCATCTGTTGCTTTATCCCAATCTGATTGCTCCTTTGAGATGGCAGTTGATTTAGCATCGGTTGCGACGTATTTGTTGGAAATGCTCCCTCCTCTAAAATCTTTTAATAGGGATACTAAAGAGAATTCTATAGCAGAGGATGAGGAAATGATTCCAGTGGAAGAATACAATGGATATGTTTTGAATGAGGATTTAGAATCCCAGATTTCAGATGCAATTGACCCTCGCTTTCTTCTCCAATTGACAAATGTTTTGTTTGGAGGAATTTCTCCATGCGGTACCAATAAAGGTGGCCCTGATGGTAGAGAAGTAATAGCTGTTGGAGCAGCATGTGCATTCCTGCATGTTACCTTTAACACATTGCCTCTTGAACGCATAATGACGATCCTAGCATACAGAACTGGGCTTGTTCCTGTTCTCTGGAATTTTATGAAACAGTGCCATGAGAATCAGAAATGGCAGATGGTGACTGAGCGATCCACGTACCTGCCAGAAGGGGCGCCTGGTTGGCTCTTGCCTCTGGCTGTCTTCTGCCCTGTATACAAGCACATGCTTATGATTGTCGATAATGAAGAGTTCTATGAGCAGGAGAAACCACTAGCATTGAAGGACATTAGATGCTTAATTGTTATCCTGAGACAGGCTTTGTGGCAGCTGCTATGGGTGAATCCCGTGACCCCATTAAGCTTGGGAAAATCAACTGCTGAAAACTTGTCATATAAGAAGCACCCATTAGAATTTCTGCATATTAGGGTCAGTGTAGTGGCCTCTGAACTTCTGTCTCAGTTGCAAGATTGGAACAATAGACGACAGTTTGCACCTTCAAGTGACTTCCATGCAGATGGTGTAAATGAATACTTTATTTCTCAGGCTATGCAGGAAAACACTAGGGCTAATGAAATTTTAAAACAAGCTCCATTCCTGGTGCCGTTTACAAGCAGGGTGAAAATCTTCGCTTCGCAGCTGGCTGCAGCAAGGAAAAGAGATGGTTCCCATGCTGTTTTTACTAGGAATCGACTCAAAATACGTCGGGATCATATCTTGGAAGATGCTTTCAATCAGTTGAGTGCCTTGTCAGATGAAGACCTTCGAGGACCGATTCGTGTAACATTCATCAATGAACTTGGAGTCGAGGAGGCTGGAATTGATGGTGGTGGGATTTTCAAAGATTTTATGGAGAACATCACGCGAGCTGCGTTTGATATACAGTATGGATTGTTTAAGGAAACAGCCGACCATCTCCTCTATCCTAACCCTGGATCAGGATTGGTTCATGAGCAGCATCTTCAGTTCTTCAATTTCCTTGGAACAATCCTTGCTAAGGCAATGTTTGAAGGGATTCTAGTGGATATACCATTTGCAACATTCTTCTTGAGCAAATTGAAACAAAAGCACAACTATCTGAATGATTTGCCTTCTCTGGATCCAGAATTGTATCGCCACCTTCTATTTTTGAAGCATTATCAAGGTGACATTGCAGACTTGGAATTGTATTTTGTCATTGTTAATAATGAATATGGGGAGCAAACAGAAGAAGATTTGCTTCCAGGAGGGAAGAATATTCGTGTTACGAATGAGAATGTGATTCCGTTTATTCATCTAATAGCTAACCATCGTTTGAATTATCAGATACGTCAGCAAAGTTCTCATTTCCTGCGAGGATTTCAGCAGCTGATACAGAAGGAGTGGATTGATATGTTCAATGAACATGAACTTCAGATTCTGATATCAGGTTCACTTGATGGCTTGGATATTGATGACCTACGGTCGCATACCCAGTACACAGGAGGATATCATGGAGAACACTATGTTATTGAGATGTTCTGGGAAGTTGTTAAGAGCTTGTCTCAGGAAAATCAGAGGAGATTTCTCAAGTTTGTAACTGGATGTTCTCGTGGACCATTACTTGGGTTCAAGTATTTGGAGCCTCAGTTTTGCATACAGAGAGCTTCCGGTAATGCTTCGGAAGAAGGTCTTGAACGCTTGCCAACAGCAGCTACTTGTATGAATCTTCTGAAACTTCCACCTTATAGAAGCAAGGAGCAACTAGAAACAAAATTGCTCTATGCTATAAATGCAGAGGCTGGGTTCGACCTGAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45574.p1 GENE.R_Transcript_45574~~R_Transcript_45574.p1 ORF type:complete len:1033 (+),score=187.77,HECT|PF00632.21|1.3e-92 R_Transcript_45574:280-3378(+)
MFFSGDPSTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLFQRQQTSAAIKIQKCFRARRAVEAEHHRIREQFFITYGRRCQNVDRSCFGPDSKFLRELLFFFNPKNEDDLFALAETCQGLQQFVKDNGDLISLFSGNDYLSNHSLVDYRVKRLTYACVLAVHSKRNQFNGQLLLSHLNSHISTVLLEAADKLIDPKLPWACKIVCYLLRRNTFSMLRDITLTAKESFQTHNSLEVSSLEHLLSRILPHVGEKPCICQNADQWWSFSSQVLTIPFVWKIFPHLKEVFARQQLSKHYVHQMALSVKSHNHVLSNDVSLEYPSHACLLGNILEAASVALSQSDCSFEMAVDLASVATYLLEMLPPLKSFNRDTKENSIAEDEEMIPVEEYNGYVLNEDLESQISDAIDPRFLLQLTNVLFGGISPCGTNKGGPDGREVIAVGAACAFLHVTFNTLPLERIMTILAYRTGLVPVLWNFMKQCHENQKWQMVTERSTYLPEGAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLALKDIRCLIVILRQALWQLLWVNPVTPLSLGKSTAENLSYKKHPLEFLHIRVSVVASELLSQLQDWNNRRQFAPSSDFHADGVNEYFISQAMQENTRANEILKQAPFLVPFTSRVKIFASQLAAARKRDGSHAVFTRNRLKIRRDHILEDAFNQLSALSDEDLRGPIRVTFINELGVEEAGIDGGGIFKDFMENITRAAFDIQYGLFKETADHLLYPNPGSGLVHEQHLQFFNFLGTILAKAMFEGILVDIPFATFFLSKLKQKHNYLNDLPSLDPELYRHLLFLKHYQGDIADLELYFVIVNNEYGEQTEEDLLPGGKNIRVTNENVIPFIHLIANHRLNYQIRQQSSHFLRGFQQLIQKEWIDMFNEHELQILISGSLDGLDIDDLRSHTQYTGGYHGEHYVIEMFWEVVKSLSQENQRRFLKFVTGCSRGPLLGFKYLEPQFCIQRASGNASEEGLERLPTAATCMNLLKLPPYRSKEQLETKLLYAINAEAGFDLS*

Click here to download the sequence:
Link to NCBI Protein BLAST