Transcript Information: R_Transcript_455816.p1


Annotated TAIR IDAT1G64970.1
Annotated Gene Namegamma-tocopherol methyltransferase
Annotated Gene Symbol(s)G-TMT, TMT1, VTE4
Annotation TypeHomolog
Chromosome Positionchr1:24134337-24135993 | Reverse length=348
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22396271110084
Replicate 20.38643497698708
Replicate 30.8431927949504
Condition 2: 8 Hour
Replicate 10.67599013658039
Replicate 20.13718332417905
Replicate 30.1113595743582
Condition 3: 24 Hour
Replicate 10.2816908862295
Replicate 20.067654168376004
Replicate 30.067140198426065


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_455816.p1 GENE.R_Transcript_455816~~R_Transcript_455816.p1 ORF type:5prime_partial len:326 (+),score=45.77,Methyltransf_11|PF08241.8|1.6e-18,Methyltransf_31|PF13847.2|1.9e+03,Methyltransf_31|PF13847.2|1.8e-14,Ubie_methyltran|PF01209.14|6.5e-13,Methyltransf_23|PF13489.2|1.7e-12,Methyltransf_25|PF13649.2|2.6e-12,Methyltransf_12|PF08242.8|1.7e-10,Methyltransf_18|PF12847.3|5.6e-09 R_Transcript_455816:1-978(+)
GTAAAAATGGTACATGGTCACAGTCTCCCATTGACTCTTTTCAAACCCGCTTTACCTCAACACCCCCAAATTGTTCCAATTGGAAGAACTTTGAATCTTCTTGATCCTTCTGCTCTCCTTTCGAGTAAAAAAATCTCCTCACCCTCTGGATTCTTAAATTGTGCTTATGGAAATACACAATCCGGACTTGCTCAAAAAATATACCGTAAACAAGCTTTAAAAACTGACTCATTAGCTCGAAATCAACAAAATATTCTTGATTGGACAAAAAAACTTCTTCCTTTATCCACTGAATCCAATGTTCTTGAAGCTAATTGCGGTACTGCAGTTTTAGGCCGTTCTCTTGCTCCCCATGTAAAGAGCGTCGTTGGAACTGATGTTTCAAGACATATGTTAGCTTTTGCAAAAGAAAAAGCACCAGATCTTACATTTCTCAATGCTGATACTGCTGATCTCCCATTCAAAGAAGAATCTTTTGATCTTGTCATTTCAAGATTTGCTTTTAACTCTTTCGAAGATATCTCAGTTCCATTAAATGAGCTCGCCCGTGTTGCTAAAACTGGTGGACATGTTGCCATCATTGAACGAGTTCCTCATCCTTCGATCCTTTCAAATAGAGAGACCCTCGACGAATTAGAGAATGTTCGTGACGGATCTCACATTACCTTCTACACTCCATCAGAAATCACATCTGCCATTTTACAAAGTGGTCTTGTTCCATTGAGAAATGCAACAATTTTTGGCGAAGATGCAACTGCAACTACCGAAGTTCATCAAGAACTCACCCAATATTTAGACATTGCTGGAGTTAAATTCCAAAACCGTCTCTTATTAACTCAAGCCATTGAAGCCAACGCCCACTACCCAGATGGTGGACCAGTTGACCAAGTATCAGGTTTTCAACCATTTTTTGTAGAAGGCAAAGAAAGAAAAGTTTTTATTGTTGAAACCCATGCAGTCATTATTGCCCGTAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_455816.p1 GENE.R_Transcript_455816~~R_Transcript_455816.p1 ORF type:5prime_partial len:326 (+),score=45.77,Methyltransf_11|PF08241.8|1.6e-18,Methyltransf_31|PF13847.2|1.9e+03,Methyltransf_31|PF13847.2|1.8e-14,Ubie_methyltran|PF01209.14|6.5e-13,Methyltransf_23|PF13489.2|1.7e-12,Methyltransf_25|PF13649.2|2.6e-12,Methyltransf_12|PF08242.8|1.7e-10,Methyltransf_18|PF12847.3|5.6e-09 R_Transcript_455816:1-978(+)
VKMVHGHSLPLTLFKPALPQHPQIVPIGRTLNLLDPSALLSSKKISSPSGFLNCAYGNTQSGLAQKIYRKQALKTDSLARNQQNILDWTKKLLPLSTESNVLEANCGTAVLGRSLAPHVKSVVGTDVSRHMLAFAKEKAPDLTFLNADTADLPFKEESFDLVISRFAFNSFEDISVPLNELARVAKTGGHVAIIERVPHPSILSNRETLDELENVRDGSHITFYTPSEITSAILQSGLVPLRNATIFGEDATATTEVHQELTQYLDIAGVKFQNRLLLTQAIEANAHYPDGGPVDQVSGFQPFFVEGKERKVFIVETHAVIIARK*

Click here to download the sequence:
Link to NCBI Protein BLAST