Transcript Information: R_Transcript_45617.p1


Annotated TAIR IDAT3G15354.1
Annotated Gene NameSPA1-related 3
Annotated Gene Symbol(s)SPA3
Annotation TypeOrtholog
Chromosome Positionchr3:5169327-5172480 | Reverse length=837
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.370061102785
Replicate 215.069925298795
Replicate 317.918980216345
Condition 2: 8 Hour
Replicate 16.7984947606983
Replicate 25.2810838449805
Replicate 38.6157414465431
Condition 3: 24 Hour
Replicate 123.539687134397
Replicate 219.641376869143
Replicate 324.409329650826


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45617.p1 GENE.R_Transcript_45617~~R_Transcript_45617.p1 ORF type:complete len:868 (+),score=161.98,WD40|PF00400.28|7.2,WD40|PF00400.28|2e+03,WD40|PF00400.28|0.00032,WD40|PF00400.28|4.3e+02,WD40|PF00400.28|0.0057,WD40|PF00400.28|42,Pkinase|PF00069.21|18,Pkinase|PF00069.21|1.4e-05,Pkinase|PF00069.21|1.7e+03 R_Transcript_45617:771-3374(+)
ATGAAAATGGAAGGTTCGTCTGATACTGGTTGGCGGAAAGTTGTTAATTCTAGAGGATTGGATACTTCTGCCTCTTCAGAAAGGAATTTGAGGCTGCTTAATGCAAGTAGAATAAGCTTATCGGCTGATGCATCAAGAAGTTCTGTGTTCGGCACAGGAAGGAGATTTAGAGATCCTTCTGCTCTGGCTCCTAGCGATTATTTAAGGAGGCGGCTTGGTGGTTCTGCCATTTCTGAGGATGAGGTTGCAGTGGACCCTTTAGTTCGTACCATTGAATGGGGTGATGTTAGTTTAAGACGGTGGCTGGACAACCCTGAACGCACCATTGACGCTATTGAAGCTCTGCATATTTTTAGGCAGGTTGTCGAAATTGTTAACACTGCACATTCTCAGGGCATTGTTCTTAATAATGTCCGTCCATCCTGCTTTGTAATGTCTTCTTTCAACCATGTCTCGTTCATCGAGTCTGCATCATGTTCAGATTCTGGTTCAGATTCCTTGGAGGACGATGGGCCGAACAGCCAAAATATGGAGACTAAGCAGGATTTTTGTGTGTGGAGAAGCAGATCTGGTCCTGAAGAATCCCAGTTGATCCTAGAAACCAATGAAACAAAAGATAGTAGAAGCTCCGAAAAGGCAGGAGAAAAGCGGTCATTCCCAATGAAAGAATTGTTGCTGATGGAGACAAGTTGGTATACTAGTCCAGAGGAGATAGCGGGTGCAGCATGTTCCTGTGCTTCAGATATTTATCGTTTAGGTGTTCTTCTCTTTGAGTTATTCTGCACATTTAGCTCAACTGTGGAAAAAAGCAGAACAATGTCTAGCTTGCGGCATCGAGTTCTTCCTCCACAACTTTTGCTGAAATGGCCTAAAGAAGCTTCATTTTGCTTATGGTTGTTGCATCCAGACCCATGTAGTCGGCCAAAAATGGGCGACTTGCTGCAAAGTGAGTTCCTTAATGAACCAAGGGATGATATTGATGAGCGTGAAGCTGCCATAGAACTCAGAGAGAAGATAGACGAACAGGAATTGTTACTTGAATTCCTTCTACTAATAAAACAGGCCAAGCAGGAAGTTGCTAATAAGTTGCATGATACTATTTCCTTTCTATCTTCTGATATTGAAGAAATTGTGAATAGACAAAGGTATCTAAAGGAGAAAGGAGCTTTCTCCTCAGATCTGGGCAGGATCCATCAGTCAACATCTAATTTTCCTGCGGTTGACACTTGTAAACATGAAAAAATGGGAAGCATGGATGCAAGAAATCACGACAGACATGAAACTCATAGTCATGATGCCATGAAGATTTGTTTTAGCGAAAGACATGATTCAGAAATGGTTGTTGAAGATGAAGAAAGTTTGCTTTCAAAGAACCCTCGATTGATGAAAAACTTTAAGAAACTTGAGTCAGCTTACCTTTCGACAAGGCACCGGTCTTCTAGGGTGTCAGCAAAGCCAGTCGGTGGTCATTCTCAACTTAGTAGCAATAGTCGGGGATCTGTAGTTTTAACTGAGAGGAGTACAAGCATTTCATTATCAAAGGAGCATCACCGGAATGATGGTGAAAGTCAATGGATTAGCCCCTTCCTTGATGGTTTGTGCAAGTATTTGTCATTCAATAATTTGAGAGAGAAAGCAGACTTGAAGCAAGCAGATCTCTTGAATTCTTCTAACCTCGTGTGCTCTGTTGATTTCGACCGTGATGGAGAGTTTTTTGCTACAGCTGGGGTTAATAAGAAGATCAAAGTATTTGAGTGTGATTCCATCCTAAATGGTGACCGTGACATCCACTATCCTGTTGTTGAGATGGCTAGTAGATCGAAGCTAAGCAGTGTTTGTTGGAATAGTTATATCAAAAGCCAGATCGCTTCTAGTAACTTTGAAGGTGTAGTACAGGTATGGGATGCTGCCCGGGGCCAAGTCTTCATGGAACTCAGAGAGCATGAAAGGAGGGTGTGGTCTGTTGATTTTTCAACAGCGGATCCAACAATATTGGCAAGTGGAAGTGACGACAGTTCAGTTAAGCTCTGGAGTATCAATCAGGGAGGAAGCATTGGTACCATCAAAACCAAGGCCAATGTCTGTTGTGTTCAGTTTCCTATGGATTCTGGTCGCTCTCTTGCATTTGGTTCAGCTGACCACCGAATATATTACTACGATTTACGGAATCCCAGAGTACCCTTGTGCACGCTGATTGGGCACAACAAGACTGTTAGCTATATCAAATTTTTGGACCCCACAAACCTGGTTTCTTCATCAACAGATAACACTCTGAAGCTCTGGGATTTGTCATTGTGTGCTTCCCGAGCTGTTGAAGGTCCTCTCCAGTCTTTTACAGGTCATACGAATGTCAAGAACTTTGTAGGACTTTCAGTATCGGATGGTTACATAGCTACAGGCTCAGAAACAAATGAGGTATTCATTTATCATAAAGCCTTGCCCATGCCAGCACTGTCATTCAAATTTAACAACGTTGATCCTCTTTCGGGCAATGAAGCGGATGATTCTGCTCAATTTATATCGTCCGTGTGTTGGCGGGGACAGTCGTCTATATTGGTGGCTGCAAATTCTACTGGAGATATTAAGCTTCTGGAAATGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45617.p1 GENE.R_Transcript_45617~~R_Transcript_45617.p1 ORF type:complete len:868 (+),score=161.98,WD40|PF00400.28|7.2,WD40|PF00400.28|2e+03,WD40|PF00400.28|0.00032,WD40|PF00400.28|4.3e+02,WD40|PF00400.28|0.0057,WD40|PF00400.28|42,Pkinase|PF00069.21|18,Pkinase|PF00069.21|1.4e-05,Pkinase|PF00069.21|1.7e+03 R_Transcript_45617:771-3374(+)
MKMEGSSDTGWRKVVNSRGLDTSASSERNLRLLNASRISLSADASRSSVFGTGRRFRDPSALAPSDYLRRRLGGSAISEDEVAVDPLVRTIEWGDVSLRRWLDNPERTIDAIEALHIFRQVVEIVNTAHSQGIVLNNVRPSCFVMSSFNHVSFIESASCSDSGSDSLEDDGPNSQNMETKQDFCVWRSRSGPEESQLILETNETKDSRSSEKAGEKRSFPMKELLLMETSWYTSPEEIAGAACSCASDIYRLGVLLFELFCTFSSTVEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPCSRPKMGDLLQSEFLNEPRDDIDEREAAIELREKIDEQELLLEFLLLIKQAKQEVANKLHDTISFLSSDIEEIVNRQRYLKEKGAFSSDLGRIHQSTSNFPAVDTCKHEKMGSMDARNHDRHETHSHDAMKICFSERHDSEMVVEDEESLLSKNPRLMKNFKKLESAYLSTRHRSSRVSAKPVGGHSQLSSNSRGSVVLTERSTSISLSKEHHRNDGESQWISPFLDGLCKYLSFNNLREKADLKQADLLNSSNLVCSVDFDRDGEFFATAGVNKKIKVFECDSILNGDRDIHYPVVEMASRSKLSSVCWNSYIKSQIASSNFEGVVQVWDAARGQVFMELREHERRVWSVDFSTADPTILASGSDDSSVKLWSINQGGSIGTIKTKANVCCVQFPMDSGRSLAFGSADHRIYYYDLRNPRVPLCTLIGHNKTVSYIKFLDPTNLVSSSTDNTLKLWDLSLCASRAVEGPLQSFTGHTNVKNFVGLSVSDGYIATGSETNEVFIYHKALPMPALSFKFNNVDPLSGNEADDSAQFISSVCWRGQSSILVAANSTGDIKLLEMV*

Click here to download the sequence:
Link to NCBI Protein BLAST