Transcript Information: R_Transcript_456282.p1


Annotated TAIR IDAT1G09910.1
Annotated Gene NameRhamnogalacturonate lyase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:3220151-3224451 | Reverse length=675
E-Value2.4E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34767544675655
Replicate 20.19996476586951
Replicate 31.0907970283882
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.2084543303514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_456282.p1 GENE.R_Transcript_456282~~R_Transcript_456282.p1 ORF type:5prime_partial len:105 (+),score=3.43,CBM-like|PF14683.2|1.6e-08 R_Transcript_456282:2-316(+)
GCAGAACTATATCCGAATGAAGATCTAGTTTACACTATCGGTGTCAGTGATTACCGCAAGGATTGGTTCTTTGCTCAAGTTCCTAGGTGTATAGCTTTGGACTCACTACTACAAAATGCTAAAACTTGTTCCAGGCAATATTTGATAGTGCTTAATGTTTCGGTGTTCAGTTCAGCTTATTTCATTTTTGTTCAATTTAGCACTATCAAAGATGCCCATAGAAATACTGTTTCTGACATCAGAGTACTGAATAATCATAAGATCATAACCAAGGTCTTCAATCAACTAACAAAGCGAAGCATATTTTGTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_456282.p1 GENE.R_Transcript_456282~~R_Transcript_456282.p1 ORF type:5prime_partial len:105 (+),score=3.43,CBM-like|PF14683.2|1.6e-08 R_Transcript_456282:2-316(+)
AELYPNEDLVYTIGVSDYRKDWFFAQVPRCIALDSLLQNAKTCSRQYLIVLNVSVFSSAYFIFVQFSTIKDAHRNTVSDIRVLNNHKIITKVFNQLTKRSIFCH*

Click here to download the sequence:
Link to NCBI Protein BLAST