Transcript Information: R_Transcript_456349.p1


Annotated TAIR IDAT1G06570.1
Annotated Gene Namephytoene desaturation 1
Annotated Gene Symbol(s)PDS1, HPD
Annotation TypeHomolog
Chromosome Positionchr1:2012015-2013543 | Reverse length=473
E-Value9E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25351334659332
Replicate 20.048602547259949
Replicate 30.15907456663995
Condition 2: 8 Hour
Replicate 10
Replicate 20.1552839016749
Replicate 30.084035234353643
Condition 3: 24 Hour
Replicate 10.1062861445727
Replicate 20
Replicate 30.050665983071522


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_456349.p1 GENE.R_Transcript_456349~~R_Transcript_456349.p1 ORF type:5prime_partial len:432 (+),score=26.92,Glyoxalase|PF00903.21|0.0035,Glyoxalase|PF00903.21|0.0024,Glyoxalase_4|PF13669.2|0.0087,Glyoxalase_4|PF13669.2|0.13,Glyoxalase_5|PF14696.2|73,Glyoxalase_5|PF14696.2|0.00011 R_Transcript_456349:2-1297(+)
TTCAAGATGGCAACAAAAACCGCGAGCATTACTGGTGATACAGATGTAACTACATATCTTGGTTATGACCATTTAGAATTTACGGTTGGTGATGCTGGTTCTATTATGAGAGCGTTTAAATATGGATTGGGAATGGAGTTAGTCGCAGAATCGAACTGGGATACTCACAACTACACCTACTGCTCTTATGTTTTAAAATCTGGTGACATTAAATTTGTTATTACCTCACCATATCTCTCCAAAATCCACGGTGAAGAGCTGCAGAAGCATAAACAACCAAACCCAACGTTCTCGTCAGAGAGAGCGCAAAAATTCTTCACTTCACACGGAAATGGTGTTAGTGCAGTTGGTGTTAAAGTGACCGACGTTAAATCTGCCTACGAGACAATTGTTTCGAGGGGTGCAACAGGAATTATTGAACCAACCGAAGTTGCAGCCTCAAATGGTGGAAAAGTCATCTTTGCTGAAATTTTAGTATATGATGACGATCTCGAGCAAATCTTAGACCACATGCCCGATGTCTATCAAGGTGTTCAATTCTTTCACAGTAATACTGTGTTTCGACTTATTCAATATGTGGATTATGAGGGAGCATTCCTTCCTGGTTATTTTCCAGTGAATGATTCTGATCACGTTAGTTTTGGACTTCAAAGAATTGATCATCTTGTTGGTAATGTGTACCGCATGGACAAAGTTGTGAATGATATTAAGACATGGTTTGGATTGCACACATTCGCTTTCTTCACACCTGAGGAAATTCGAACGAAATGGACAAGTCTTAATTCAGAAGTTCTCGCAAGTAATCATGCTGAGATCTTATTTCCTATCAACGAACCCGCTACTGGTAAGAAAGAGTCCCAAATCCTTAAATACCTCAAAGCTTATAACGGTCCTGGCGTTCAACACATTGCCATCAAAACTTCGAATATCTTTGAAACCCTAAAGCAAATGAAATCCGTTCCTGGCGGTATTCGATTACTCGGTACACCAAATTCCTACTATGAAACAGATTATATTAATAATCGTATTAAAGATTGTGCTGCCACCGGTGCTACGTTTACTGAATTTGACCAACTTAAAGCAGAATTACTTAAATACAATATTTTAATCGATCAAGATGAAAGCGGTATTTTACTTCAAATCTTCACTATGCCTCTCTTTGATCGTCCTACTATCTTTATTGAAATCATTCAACGAATTTGTTTTGGTGAAGAAATTCCAGGTTGTGGTAAATTCGGTCAAGGTAATTTCAAAGCTCTTTTTGAAGCCCTTGAACGATTTTTTGAAGGAAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_456349.p1 GENE.R_Transcript_456349~~R_Transcript_456349.p1 ORF type:5prime_partial len:432 (+),score=26.92,Glyoxalase|PF00903.21|0.0035,Glyoxalase|PF00903.21|0.0024,Glyoxalase_4|PF13669.2|0.0087,Glyoxalase_4|PF13669.2|0.13,Glyoxalase_5|PF14696.2|73,Glyoxalase_5|PF14696.2|0.00011 R_Transcript_456349:2-1297(+)
FKMATKTASITGDTDVTTYLGYDHLEFTVGDAGSIMRAFKYGLGMELVAESNWDTHNYTYCSYVLKSGDIKFVITSPYLSKIHGEELQKHKQPNPTFSSERAQKFFTSHGNGVSAVGVKVTDVKSAYETIVSRGATGIIEPTEVAASNGGKVIFAEILVYDDDLEQILDHMPDVYQGVQFFHSNTVFRLIQYVDYEGAFLPGYFPVNDSDHVSFGLQRIDHLVGNVYRMDKVVNDIKTWFGLHTFAFFTPEEIRTKWTSLNSEVLASNHAEILFPINEPATGKKESQILKYLKAYNGPGVQHIAIKTSNIFETLKQMKSVPGGIRLLGTPNSYYETDYINNRIKDCAATGATFTEFDQLKAELLKYNILIDQDESGILLQIFTMPLFDRPTIFIEIIQRICFGEEIPGCGKFGQGNFKALFEALERFFEGK*

Click here to download the sequence:
Link to NCBI Protein BLAST