Transcript Information: R_Transcript_456354.p1


Annotated TAIR IDAT5G52650.1
Annotated Gene NameRNA binding Plectin/S10 domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21355781-21357003 | Reverse length=179
E-Value1E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39465861523716
Replicate 20
Replicate 30.12382020322245
Condition 2: 8 Hour
Replicate 10
Replicate 20.12086963157398
Replicate 30.19623362832851
Condition 3: 24 Hour
Replicate 10.12409625528489
Replicate 20.23843523124948
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_456354.p1 GENE.R_Transcript_456354~~R_Transcript_456354.p1 ORF type:5prime_partial len:185 (+),score=-15.66,S10_plectin|PF03501.11|9.8e-40 R_Transcript_456354:3-557(+)
TTGGAGCTGCCTTATTGCTCCTCGTCTGTTCCCGCGTGTCGCCTCGCAGCCACCATGCTCGTCCCGAAGAAGAACCGTCTCGCCGTCTATTCCTTCCTCTTCAAGGAGGGCGTCATCGTGACGAAGAAGGATCACTCGATGACGAAGCACCCGCAGCTGGAGGTGCCGAACCTGCATGTCTGCAAGCTCCTCCAGTCGCTCAAGTCGCGCGCTGTCGTGACTGAGAAGTTCAACTGGCAGTACCTCTACTACACTCTGACCGATGATGGCATTGAGTACCTCCGCAACTACCTCCACGTCTCGGAGGAGACCGTCCCGGCGACCCTCAAGAAGCCGTCGAAGCCGCAGCCGCCGGCCTCCTTCGGCCATGCCATGCGCGATGGCGAGGAGCGCGGTCGTGGTGGCTTCCGCGGTGGTCGCGGTGGCCGTGGTGGCTACCGTGGTCCGCGCGAGTCGGGCGAGACGTCGGACATGGGCGCCTCGCGCGGTGGCTTCGCGTCGCGCGGCGGCATGGCCTCGCGCGGTGGACGCGGTGGCGCCGTTGCTTCGGACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_456354.p1 GENE.R_Transcript_456354~~R_Transcript_456354.p1 ORF type:5prime_partial len:185 (+),score=-15.66,S10_plectin|PF03501.11|9.8e-40 R_Transcript_456354:3-557(+)
LELPYCSSSVPACRLAATMLVPKKNRLAVYSFLFKEGVIVTKKDHSMTKHPQLEVPNLHVCKLLQSLKSRAVVTEKFNWQYLYYTLTDDGIEYLRNYLHVSEETVPATLKKPSKPQPPASFGHAMRDGEERGRGGFRGGRGGRGGYRGPRESGETSDMGASRGGFASRGGMASRGGRGGAVASD*

Click here to download the sequence:
Link to NCBI Protein BLAST