Transcript Information: R_Transcript_456477.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value4E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28081478391875
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.17200678339374
Replicate 30.27925554800595
Condition 3: 24 Hour
Replicate 10
Replicate 20.16965583761983
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_456477.p1 GENE.R_Transcript_456477~~R_Transcript_456477.p1 ORF type:internal len:130 (+),score=19.02,gag_pre-integrs|PF13976.2|5.9e-10 R_Transcript_456477:1-387(+)
GGTGAACAACGGCGTGGGGTCTATGTCTTCCATAGTGCTATGTCTTGTCATGCTCTCAGTGCTCGTGTGGAAGAAACAATTGACCTTTGGCACCGACGTCTTGGACATGCCTCTACAAAAGTTGTTAGTTTGTTACCTGGTTTAAATAAAGCTCGCAGTAGTGGTGTTTGTGGACATGAACTTTGTGATGTTTGTTTAAGAGCTAAACAGACTCGTGGGGCTTTTCCATTAAGTACTAATCGTGCATCTTGTGCTTTTGAACTCATACACTGTGATGTATGGGGTCCTTATCGTGCTACTGCCTCTTGTGGTGCCTCCTATTTTTTAACCATTGTGGATGATTATACTCGAGCTGTTTGGGTGCATTTGATGAGTGATAAAACAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_456477.p1 GENE.R_Transcript_456477~~R_Transcript_456477.p1 ORF type:internal len:130 (+),score=19.02,gag_pre-integrs|PF13976.2|5.9e-10 R_Transcript_456477:1-387(+)
GEQRRGVYVFHSAMSCHALSARVEETIDLWHRRLGHASTKVVSLLPGLNKARSSGVCGHELCDVCLRAKQTRGAFPLSTNRASCAFELIHCDVWGPYRATASCGASYFLTIVDDYTRAVWVHLMSDKTE

Click here to download the sequence:
Link to NCBI Protein BLAST