Transcript Information: R_Transcript_456507.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.23200331951711
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.3008554246473
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_456507.p1 GENE.R_Transcript_456507~~R_Transcript_456507.p1 ORF type:internal len:181 (+),score=17.69,RVT_1|PF00078.23|1.2e-34 R_Transcript_456507:3-542(+)
TCGGACTATAGGCCTATATCTCTTTGCAATGTGTCTTATAAGGTTGTTTCCAAGATTATTGCTAATAGACTCAAATCTTTCCTTGACTACTTTGTGAGTCCCTATCAAGCCTCCTTTGTGCCGGGGAGATTTATTTCCGATAACACAGTCCTTATTAATGAAATTATGCATGTTATGTCCAAGAGCTGTTCCAAAGAAGGTTTGATGGCTATTAAAATTGACATGGCTAAGGCGTATGATAAATTGGAATGGCCTTTCTTGACTAGAGTCCTGAAGGAGGTGGGTTTCTCTAATAAGGTGGTACAGCTTATCCACCAGTGTATTAGTACTACCTCTTATTCGGTGTTGATCAATGGGAGACCTAGTGAACTTCTACGCCCTCAAAGGGGCCTGAGACAAGGGGATCCTTTGTCCCCTTTTTTATTTGTGATTGCTATGGAGGTTGTGTCTAGGCTGGCTCTGAGTAAGCAGGAGTCAGGTGATCTGGTTGGTATTTCTATTGACAAAAAATGTCAGCCTATAACCCATCTTATGTATGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_456507.p1 GENE.R_Transcript_456507~~R_Transcript_456507.p1 ORF type:internal len:181 (+),score=17.69,RVT_1|PF00078.23|1.2e-34 R_Transcript_456507:3-542(+)
SDYRPISLCNVSYKVVSKIIANRLKSFLDYFVSPYQASFVPGRFISDNTVLINEIMHVMSKSCSKEGLMAIKIDMAKAYDKLEWPFLTRVLKEVGFSNKVVQLIHQCISTTSYSVLINGRPSELLRPQRGLRQGDPLSPFLFVIAMEVVSRLALSKQESGDLVGISIDKKCQPITHLMYA

Click here to download the sequence:
Link to NCBI Protein BLAST