Transcript Information: R_Transcript_45662.p1


Annotated TAIR IDAT5G57190.1
Annotated Gene Namephosphatidylserine decarboxylase 2
Annotated Gene Symbol(s)PSD2
Annotation TypeOrtholog
Chromosome Positionchr5:23171531-23175364 | Reverse length=635
E-Value1.7E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.814450220821
Replicate 26.7793697268925
Replicate 39.622265949481
Condition 2: 8 Hour
Replicate 14.2984590503001
Replicate 26.5890999782804
Replicate 39.3318625133024
Condition 3: 24 Hour
Replicate 16.045316009803
Replicate 25.5310994082953
Replicate 36.3124414770989


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45662.p1 GENE.R_Transcript_45662~~R_Transcript_45662.p1 ORF type:3prime_partial len:319 (+),score=50.19,PS_Dcarbxylase|PF02666.11|5.9e-29,C2|PF00168.26|9.2e-07 R_Transcript_45662:267-1220(+)
ATGGGACAAGCACATGCTAAAGGAGCTCCTGACAATGGTGGTTCCGGTTCGAAGTTATCTCATCGGTCGAGATTCCGGCAAAAACTCCGGCGTATTTATCGCCGGAACAGCCACCACTGTTCCGATCATCATCATAATCGTCGTTCCACGTCAGGCGGTTATAAGCTTATCTCTGCTGATGATTTCGCCGGAATCGCTCTTCTCACTCTCATTTCCGCGGAGATGAAATTTAAGGACAAATGGCTGGCGTGTGTTTCGTTAGGAGAGCAAACTTTCCGGACTGATATCTCTGATCAAACAGACAAGCCTGTTTGGAACTCGGAAAAGAAACTTCTTTTGGAAAGTAGTGGGCCTCGTGTTGCAAGAGTATCTGTCTATGAGACCAATGTATTGAGGAAGAACAATATCATAGGGTATTGTGAGATTGATCTGTTTCAATTTCTGACTCAGGATTCAGATTCTGAAGCAGTTGATCTCTTGGATCCATCCTCTCCTAACATTGTTGTCGGTCAACTCTATTTCTCATGTTTTGTTGAGGATCCAGAAGAAACTGAAAAAGGTTTTGCAAGGCGTATACTATCTATTGTGGATCAGATCAATTTATCTGAAATGAAATATCCATTGGATCATTTTAAGACATTTAATGAATTTTTCATCAGGGAATTGAAGCCTGGGGCAAGACCCATTGCCTGTATGGATCGTGATGATGTTGCAGTGTGTGCTGCTGATTGCCGTCTAATGGCTTTTAGAACTGTCGAAGAGAGCACCAGATTTTGGATAAAGGGCCGCAAGTTTTCTGTTCAAGGCCTATTGGGAAATGGCATTTCTTCAAGTCCTTTCATTGATGGTACATTAGTGATATTCCGTTTGGCACCTCAGGACTACCATCGGTTTCATGTACCAGTTTCAGGAACCATTGAGCAATTCATTGATATCCCTGGGTCCTTATACACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45662.p1 GENE.R_Transcript_45662~~R_Transcript_45662.p1 ORF type:3prime_partial len:319 (+),score=50.19,PS_Dcarbxylase|PF02666.11|5.9e-29,C2|PF00168.26|9.2e-07 R_Transcript_45662:267-1220(+)
MGQAHAKGAPDNGGSGSKLSHRSRFRQKLRRIYRRNSHHCSDHHHNRRSTSGGYKLISADDFAGIALLTLISAEMKFKDKWLACVSLGEQTFRTDISDQTDKPVWNSEKKLLLESSGPRVARVSVYETNVLRKNNIIGYCEIDLFQFLTQDSDSEAVDLLDPSSPNIVVGQLYFSCFVEDPEETEKGFARRILSIVDQINLSEMKYPLDHFKTFNEFFIRELKPGARPIACMDRDDVAVCAADCRLMAFRTVEESTRFWIKGRKFSVQGLLGNGISSSPFIDGTLVIFRLAPQDYHRFHVPVSGTIEQFIDIPGSLYT

Click here to download the sequence:
Link to NCBI Protein BLAST