Transcript Information: R_Transcript_4568.p1


Annotated TAIR IDAT5G58575.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23674399-23675224 | Forward length=181
E-Value3.9E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7253165003326
Replicate 28.1908644481163
Replicate 37.1740881482455
Condition 2: 8 Hour
Replicate 18.6104140473829
Replicate 213.760542671499
Replicate 314.361713897449
Condition 3: 24 Hour
Replicate 112.361896199533
Replicate 28.9675228456193
Replicate 39.1399206384846


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4568.p1 GENE.R_Transcript_4568~~R_Transcript_4568.p1 ORF type:complete len:182 (+),score=30.66,Sgf11|PF08209.7|6.6e-17 R_Transcript_4568:215-760(+)
ATGGTTTTCGTTAATCGACCCTATTTCAAAGACCCGCTTTTTTTTTTTTTCCAGGTTTGCTTTATCTTCATTGAAGCAGTGATGTCTGCAGCCAATGAAGACAGTACATCTCAAGCTCAGCTATCGTCACAGTTTTTCAATGACATGTTGGATTCCATTATTGTTGATGTTGCATCAGAGTGTCACCGGATAGCAAGGCTTGGCCTTGATCGGAATTTGGAAGAAGAGGAAGAAGAACTCAAGTTGTCAGCACAGGCTAGAGCAAAGCTCGCTGATTCAAGTAACAGTGGTGAAGCTAATGGCAAGTATGTAGTGGACATATTTGGACAAACACACCCAACCGTGGCCAACGAAATATTTGAATGCATGAACTGCAGAAGGTCAATAGCTGCTGGAAGATTTGCCCCACATTTGGAGAAATGCATGGGAAAGGGTAGAAAGGCACGCAAGGTAACAAGAAGCAGCACAGCAGCACAGAATCGACACTCCCGAGGAAGCCCGCTCTCCACACATTCCCCTTACTCTAATTCCACATCCATGAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4568.p1 GENE.R_Transcript_4568~~R_Transcript_4568.p1 ORF type:complete len:182 (+),score=30.66,Sgf11|PF08209.7|6.6e-17 R_Transcript_4568:215-760(+)
MVFVNRPYFKDPLFFFFQVCFIFIEAVMSAANEDSTSQAQLSSQFFNDMLDSIIVDVASECHRIARLGLDRNLEEEEEELKLSAQARAKLADSSNSGEANGKYVVDIFGQTHPTVANEIFECMNCRRSIAAGRFAPHLEKCMGKGRKARKVTRSSTAAQNRHSRGSPLSTHSPYSNSTSMN*

Click here to download the sequence:
Link to NCBI Protein BLAST