Transcript Information: R_Transcript_4571.p1


Annotated TAIR IDAT5G58575.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23674399-23675224 | Forward length=181
E-Value3E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.881107271337
Replicate 210.557461791246
Replicate 314.365242221316
Condition 2: 8 Hour
Replicate 111.89708692352
Replicate 216.928577213101
Replicate 314.152103195556
Condition 3: 24 Hour
Replicate 112.581397181284
Replicate 212.959022172995
Replicate 313.726187685003


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4571.p1 GENE.R_Transcript_4571~~R_Transcript_4571.p1 ORF type:complete len:177 (+),score=44.27,Sgf11|PF08209.7|6.3e-17 R_Transcript_4571:293-823(+)
ATGTCTGCAGCCAATGAAGGCAGTACATCTCAAGCTCAGCTATCGTCACAGTTTTTCAATGACATGTTGGATTCCATTATTGTTGATGTTGCATCAGAGTGTCACCGGATAGCAAGGCTTGGCCTTGATCGGAATTTGGAAGAAGAGGAAGAAGAACTCAAGTTGTCAGCACAGGCTAGAGCAAAGCTCGCTGATTCAAGTAACAGTGGTGAAGCTAATGGCAAGTATGTAGTGGACATATTTGGACAAACACACCCAACCGTGGCCAACGAAATATTTGAATGCATGAACTGCAGAAGGTCAATAGCTGCTGGAAGATTTGCCCCACATTTGGAGAAATGCATGGGAAAGGGTAGAAAGGCACGCAAGGTAACAAGAAGCAGCACAGCAGCACAGAATCGACACTCCCGAGGAAGCCCACTCTCCACACATTCCCCTTACTCAAATTCCACATCCATGAACCGATTATCAAATGGATCACCAGTTGTTGCAGGTGATGAATACCTCAATGGAACAACTGAAGACTCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4571.p1 GENE.R_Transcript_4571~~R_Transcript_4571.p1 ORF type:complete len:177 (+),score=44.27,Sgf11|PF08209.7|6.3e-17 R_Transcript_4571:293-823(+)
MSAANEGSTSQAQLSSQFFNDMLDSIIVDVASECHRIARLGLDRNLEEEEEELKLSAQARAKLADSSNSGEANGKYVVDIFGQTHPTVANEIFECMNCRRSIAAGRFAPHLEKCMGKGRKARKVTRSSTAAQNRHSRGSPLSTHSPYSNSTSMNRLSNGSPVVAGDEYLNGTTEDS*

Click here to download the sequence:
Link to NCBI Protein BLAST