Transcript Information: R_Transcript_45724.p1


Annotated TAIR IDAT2G40316.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 27 (InterPro:IPR018939); Has 138 Blast hits to 138 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 62; Plants - 33; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16836355-16838688 | Forward length=276
E-Value6E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8734775349343
Replicate 23.9497990882145
Replicate 36.5771820820636
Condition 2: 8 Hour
Replicate 13.272863136513
Replicate 26.7525435262986
Replicate 34.2233945502881
Condition 3: 24 Hour
Replicate 15.3416680183272
Replicate 25.568406947621
Replicate 34.9843287900855


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_45724.p1 GENE.R_Transcript_45724~~R_Transcript_45724.p1 ORF type:internal len:202 (+),score=17.63 R_Transcript_45724:1-603(+)
GCAGCTTCTAGTTCTAAATTTCGTGATTACAATTCTGGAAGCAGCAGCAATAGTAATACTATGATGATGATGATGATGATGATGATGATGAATGCTCACGTTTGGGTGGCCAAGCTCACTCTCTTTCTACTACTTACAATTACTAGCTTCAACTCTGTCTATTCTATTTCTACTGCTACTTGCGAATACAGTACCCTTGAGAGCAACAAGCTTTATAGTTATAGTTTAGCTTCTCCGATCAATAAATTTCCTCATGGCCTTCTCAGCGAGGATGGGTTTTATAAAGTTGCAAGAAATGATACTATTATCTGGTTTCAGCTTTGCGATGGGATGATCTTCAACCATGATCCTCCTAGATGCGTTGATTGTTGGGATTGTGGTGGCCCATCGCGCTGCGGTATGGGTTGTAGTGCACTTGTGGCTAAGGACACTGGTGGCTACCATGTTTGCATAGCTATTGGCCGTGATTTGAAGTTCGGCATCAATCTAATGGATAAAAGGACTCCAGATTTGGGTGTCAACGTTACGATGTCAAGCAATAGCCACGGAGTCAACTGTTCACTTTCTATCTCTGTCGTATGTGACTTAAATGGTTTTAAGGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_45724.p1 GENE.R_Transcript_45724~~R_Transcript_45724.p1 ORF type:internal len:202 (+),score=17.63 R_Transcript_45724:1-603(+)
AASSSKFRDYNSGSSSNSNTMMMMMMMMMMNAHVWVAKLTLFLLLTITSFNSVYSISTATCEYSTLESNKLYSYSLASPINKFPHGLLSEDGFYKVARNDTIIWFQLCDGMIFNHDPPRCVDCWDCGGPSRCGMGCSALVAKDTGGYHVCIAIGRDLKFGINLMDKRTPDLGVNVTMSSNSHGVNCSLSISVVCDLNGFKE

Click here to download the sequence:
Link to NCBI Protein BLAST