Transcript Information: R_Transcript_457394.p1


Annotated TAIR IDAT2G27600.1
Annotated Gene NameAAA-type ATPase family protein
Annotated Gene Symbol(s)SKD1, VPS4, ATSKD1
Annotation TypeHomolog
Chromosome Positionchr2:11781226-11783730 | Forward length=435
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.18580796828582
Replicate 30.4054289840027
Condition 2: 8 Hour
Replicate 10
Replicate 20.19788391009899
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_457394.p1 GENE.R_Transcript_457394~~R_Transcript_457394.p1 ORF type:internal len:113 (+),score=17.00 R_Transcript_457394:3-338(+)
AAAAGAATATATATCGGATTACCTGACGTCATGGCAAGACAAAGAATGTTTGAAATTCATGTTGGCAAAACTCCGAACATTTTAACGCAAAATGATTTCCGGCAATTAGCGGAATTAACCGAAGGCTATTCTGGATCTGATATTGCAATTGTGGTTAGAGAAGCATTGATGGAACCAGTTAGAAAAGTACAAAGTGCAACTCATTTTAAAACAGTAGTTGCCCCTGACAGAGAAAATCCCACACAACCAAAGCAATATATCACTCCTTGTTCTCCTGGAGACTCAGATGCATTTCCATTTAATTGGATGGAACTTGAGGATGGAAGCTTGTTGATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_457394.p1 GENE.R_Transcript_457394~~R_Transcript_457394.p1 ORF type:internal len:113 (+),score=17.00 R_Transcript_457394:3-338(+)
KRIYIGLPDVMARQRMFEIHVGKTPNILTQNDFRQLAELTEGYSGSDIAIVVREALMEPVRKVQSATHFKTVVAPDRENPTQPKQYITPCSPGDSDAFPFNWMELEDGSLLI

Click here to download the sequence:
Link to NCBI Protein BLAST