Transcript Information: R_Transcript_4574.p1


Annotated TAIR IDAT5G58575.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Sgf11, transcriptional regulation (InterPro:IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23674399-23675224 | Forward length=181
E-Value6.7E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.16532520012833
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.14292606787706
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.17234413139289


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_4574.p1 GENE.R_Transcript_4574~~R_Transcript_4574.p1 ORF type:complete len:127 (-),score=14.84 R_Transcript_4574:339-719(-)
ATGAACAAAACAATACTCCTATCTTTTCTCCCTTTATTTTATGGTCTAACCTTGAAGCAGGTTTCACTGAAAGCACAAGATGCACAAAGCCAACTACATAGGAAACAAACTTATCTCTTTTGTATTTTAAATACCTTTCCCATGCATTTCTCCAAATGTGGGGCAAATCTTCCAGCAGCTATTGACCTTCTGCAGTTCATGCATTCAAATATTTCGTTGGCCACGGTTGGGTGTGTTTGTCCAAATATGTCCACTACATACTTGCCATTAGCTTCACCACTGTTACTTGAATCAGCGAGCTTTGCTCTAGCCTGTGCTGACAACTTGAGTTCTTCCTCTTCTTCCAAATTCCGATCAAGGCCAAGCCTTGCTATCCGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_4574.p1 GENE.R_Transcript_4574~~R_Transcript_4574.p1 ORF type:complete len:127 (-),score=14.84 R_Transcript_4574:339-719(-)
MNKTILLSFLPLFYGLTLKQVSLKAQDAQSQLHRKQTYLFCILNTFPMHFSKCGANLPAAIDLLQFMHSNISLATVGCVCPNMSTTYLPLASPLLLESASFALACADNLSSSSSSKFRSRPSLAIR*

Click here to download the sequence:
Link to NCBI Protein BLAST