Transcript Information: R_Transcript_457513.p1


Annotated TAIR IDAT1G55860.1
Annotated Gene Nameubiquitin-protein ligase 1
Annotated Gene Symbol(s)UPL1
Annotation TypeHomolog
Chromosome Positionchr1:20879900-20895393 | Reverse length=3930
E-Value6E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23401231993229
Replicate 20.26918333867049
Replicate 30.29367612302759
Condition 2: 8 Hour
Replicate 10.15696067273875
Replicate 20
Replicate 30.11635647833581
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_457513.p1 GENE.R_Transcript_457513~~R_Transcript_457513.p1 ORF type:5prime_partial len:156 (+),score=7.54,HECT|PF00632.21|1.7e-55 R_Transcript_457513:3-470(+)
TCGATTGAAAAGCAAATTCAAAGCGTTTTGAAAGGTCTTTATGAACTCATTCCCCGCCGACTCATTTCTATTTTTAATGAACTAGAAATTGAGTTATTAATTTCTGGTTTACCGGACATCGATGTGGAGGATATGCGCGCTAATACTGAATACACTGGCTATAAACCTGATTCTCGCACTGTTCAATCATTCTGGAAAATTGTCAAAGCGTATTCGAATGAAGAACGAGCATTACTATTACAGTTTATTACCGGTTCAAGTAAAGTTCCACTCGACGGATTTGCAGCATTACAAGGCATGGGTGGCCCACAAAAACTTCATATTACTCGTGTTCCTGACGCTGATCGTCTTCCAACTGCTCATACCTGCTTCAATCAACTTGATTTACCGGACTACAATACGGAAGAAGAGTTAGAACAAAAATTACTTCTTGCAATTAAGGAAACAACCGGTTTTGGATTTGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_457513.p1 GENE.R_Transcript_457513~~R_Transcript_457513.p1 ORF type:5prime_partial len:156 (+),score=7.54,HECT|PF00632.21|1.7e-55 R_Transcript_457513:3-470(+)
SIEKQIQSVLKGLYELIPRRLISIFNELEIELLISGLPDIDVEDMRANTEYTGYKPDSRTVQSFWKIVKAYSNEERALLLQFITGSSKVPLDGFAALQGMGGPQKLHITRVPDADRLPTAHTCFNQLDLPDYNTEEELEQKLLLAIKETTGFGFG*

Click here to download the sequence:
Link to NCBI Protein BLAST